Notothenia coriiceps (black rockcod): 104965734
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Entry
104965734 CDS
T04920
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104965734 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104965734 (tbpl1)
03021 Transcription machinery [BR:
ncc03021
]
104965734 (tbpl1)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
104965734 (tbpl1)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104965734 (tbpl1)
RNA polymerase III system
TFIIIB
104965734 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
104965734 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
104965734
NCBI-ProteinID:
XP_010793046
UniProt:
A0A6I9PXJ9
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MDSSNDEALDIIITNVVATFRVRCHLNLRTIALEGNNVIYKPDCGKVLMKLRKPKITASI
WSSGKIICTGATSEDDAKLGARRLARVLQKLGFRVRFSAFKVVNVLAVCSMPFSIALIDF
TMNNRPIASYEPELHPAATYRIKHIKATVQVFSTGSITVTGPNVQTVATAVEQVYPLLFE
CRKPLRK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggattccagcaatgatgaggcactcgatatcattatcaccaatgtggtggccacattc
agggtcaggtgccacctcaacctgcgcaccatcgccttagaggggaacaatgtcatctat
aagccggattgtgggaaagtcctgatgaagcttcgtaaacccaaaataacagcttcaatc
tggtcctcagggaaaatcatctgcacaggagccacaagtgaggatgacgcaaagctgggc
gctcgcaggttagcccgtgttctgcagaaactgggcttcagggtgaggttttcagccttc
aaagtggtgaatgttctggcagtgtgctccatgcccttttcgatcgctcttatagacttt
acaatgaacaaccgacccattgccagttatgaaccggagctccatcctgctgccacctac
aggatcaaacatattaaagctaccgtccaggtgttctcgactggcagcatcacagttaca
ggaccaaatgtgcagactgtggccacagctgttgagcaggtgtacccactactgttcgag
tgtaggaaacccctccgcaaatag
DBGET
integrated database retrieval system
