Notothenia coriiceps (black rockcod): 104965832
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Entry
104965832 CDS
T04920
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104965832
03036 Chromosome and associated proteins [BR:
ncc03036
]
104965832
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104965832
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104965832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-met
LIM
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_REST
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
104965832
NCBI-ProteinID:
XP_010793149
UniProt:
A0A6I9PQ59
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MEGEVASMETSDELAPDGKSLTESGDALIQGAVLAAQGDVTDNMEMLVMDALDPALLQMK
TEVLESGGTVTVTGGDEGQIITLQVVNMEEQAGGALSLGQLQLVQVPVTATNVGGLQATY
VDASNVNKDSDPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQCVREEEEEE
EPAEIETNMSQQEDPEWTKDPDYQPISGLRGKGKKGKKSRLRYGEGDRDMDVSVYDFEEE
QQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDE
RPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTHEKPF
KCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYI
CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKKCRY
CDAVFHERYALIQHQKTHKNEKRFKCEQCDYCCRQERHMVMHKRTHTGEKPFACSQCDKT
FRQKQLLDMHFKRYHDPNFIPTAFVCSKCNKTFTRRNTMLRHTENCNGEIDEDEDENGTP
APKKARRGRKRKMQSRRDEDDSEDELEDIEEEEELSELEVEQAPPVVPIPAPIEPPVKRK
RGRPPKNKPATAAIIRVEDEATGEVDDIIVKKEVGADQVDQDDETVEQVVVGGEKTTIQL
EELSQEEEEGAVEAEAPPNGDLTPEMILSMMDR
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgcttccatggagaccagtgatgaactggctcctgatggaaagagc
ctaacagagagcggagacgctctgatacagggggccgtcctggctgcacagggggacgtg
actgacaacatggagatgctggtgatggacgctcttgatcccgctctgttacaaatgaag
acggaggtgttggagagtggaggcacggtgactgttactggtggagatgagggtcagatc
atcacacttcaggtggtgaacatggaggagcaggcaggaggtgcactaagtcttggtcag
ctgcagctggtgcaggttcccgtcacagcaaccaatgtaggggggctccaggccacctat
gttgacgcatcaaacgtaaacaaggattcagatccagttatctgtcacactcttcctttg
cccgagggcttccaggtggttaaagtgggcgccaatggtgaggtagagactgtagagcag
gaggagcttcaagcggcccacgatgagcttcaatgtgtgagggaggaggaggaagaggaa
gagcctgcagaaatagaaaccaatatgtctcaacaagaagacccagaatggaccaaggac
ccagactaccagcctatctccggcctccgtggtaaagggaagaagggaaagaagagccgc
ctgcgctacggagagggcgatcgggacatggatgtttctgtgtacgactttgaagaagag
cagcaggaggggatgctgtctgaagtgaatgcagagaaggttgtgggcaacatgaagcca
ccaaagcccaccaagatcaagaagaaaggtgtaaagaagactttccagtgcgagttgtgt
agctacacctgtccaaggcgctccaacctggacagacacatgaagagccatacagacgag
aggccacataaatgtcacttgtgtgggcgggccttccgaacggtcactctgctgagaaac
cacctcaatacacacacaggcactcgtccacataaatgccaagactgcgacatggcattt
gtgaccagcggagagttggtgcgtcatcggcgctacaaacacacgcatgagaagcccttc
aagtgctccatgtgtgactactgcagtgtggaggtgagcaagttgaaaaggcacatccgc
tctcatacaggagagcgacccttccagtgcagtctgtgcagctatgccagcagagacacc
tataagctgaaaagacacatgaggacacattcaggtgaaaagccatacgagtgctacatc
tgccatgcccgtttcactcagagtggaaccatgaagatgcacattctgcagaaacacacg
gagaacgtggcaaagttccactgcccacactgtgatacggtcattgctcgcaaaagcgat
cttggtgttcatttgaggaagcaacattcatttattgagaagggaaagaagtgccgttac
tgtgatgctgtgtttcatgagcgatacgctctcatccagcaccagaaaacccacaagaat
gagaaacgcttcaagtgtgaacagtgtgactactgctgcagacaggaacgccacatggtg
atgcacaagcgcacacacacgggggagaagccgtttgcctgcagtcagtgtgacaaaacc
ttcaggcagaagcagcttctggatatgcacttcaagcgctaccacgaccccaactttatc
cccactgccttcgtgtgctccaagtgtaacaagacgttcactcgcaggaacaccatgctg
cgtcacactgaaaactgcaacggcgaaattgatgaagatgaggatgaaaatggaactcct
gcacccaaaaaggcacgccgggggaggaagaggaaaatgcagagcaggagggacgaggac
gactcagaggatgaactggaagatatcgaggaggaagaggagttaagtgagcttgaggtg
gaacaggccccccctgttgtcccgatcccagcccctatcgagcccccagtcaagaggaaa
cgtggacggcccccaaagaacaaaccagccacagccgctatcatccgtgtggaggacgag
gccactggagaggtggatgacatcatcgtgaagaaggaggtgggagccgatcaagtagac
caggatgacgagaccgtggagcaagtggtggtcgggggagaaaagaccaccatccagctg
gaggagttgtcccaggaggaggaggagggggcagtagaggccgaggccccgcccaacgga
gacttgacccctgagatgatcctcagcatgatggaccggtga
DBGET
integrated database retrieval system
