Notothenia coriiceps (black rockcod): 104965931
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Entry
104965931 CDS
T04920
Symbol
fam188b
Name
(RefSeq) protein FAM188B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104965931 (fam188b)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104965931 (fam188b)
Ubiquitin system [BR:
ncc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
104965931 (fam188b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
M60-like_N
Motif
Other DBs
NCBI-GeneID:
104965931
NCBI-ProteinID:
XP_010793300
UniProt:
A0A6I9PYZ0
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MVVSVEEVASSVVREYLNRKGLKRTIACMDEEHPRTKASINNRSHLRQILHMEGLYSNNK
AQNSPLKTLLEIIVKHHFEGQDKIPSNESDPRPSDQAKSWTSNSPAVTPTVMNNRNTEDS
TTAFVISKHNILRSYRGDFCTSQPETDPLSSHYQTGFWACDLEEQKDQSLRASLHDNERL
TRSETEKQILITESTQRSRSNRIRRGMMAGPIASTAQDSNKKRQNRKLEGPHPLLKEVED
NRRSVDGVLVAGKHKKSPESSQIHSADCVEGQWEMWSAPERLPRENSFEKVQQDVRKTTK
VKSLSSPNVADLDVSEMVLDDIDDDEDLGVLSKVSFHRTVVEHSYAGYPMDLHTAMELKA
VLLGTSLNCFSVEWRNQGLTFSETHDLRYGIVQKKGGPCGVLASFQAFVLKKLLFENTES
SSIGLQRLRPSNSTRRKCLVLAAAEILWRAGEEKQATVAINSGRNHFTPAGHYKSEGVLE
KITCFTLDNFKDLQLLLERHIDQFETGALGCLLLSISAVLSRTITKVREDMDVHTNTLIG
AHGYCTQELVNLLLCGRAVSNVFDNDIELDSGNGNMTLLKGVKDPCDVGLLSLFEHYNIC
KVGAYLKTPHYPIWVVCSESHFSVLFGLQRELLTNQDKGLEFDLYYYDGLANQQEEIRLT
VFVGKSALSYQDVDTDLIPPLEHCIRTRWKDAFVNWNDTEPIL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtttcagttgaagaggtggcttcgtccgttgtacgagagtatctgaaccgaaag
ggtctcaagaggacaatagcttgtatggacgaagaacatcctcgcacaaaggcgagtatc
aacaacagatcccacttgaggcagattctacacatggaggggctctatagtaataataaa
gctcagaactcacccttgaaaacattactggagattattgtgaagcatcattttgagggg
caggacaagatccccagcaatgaaagtgatccccgtccgtctgatcaggctaagagctgg
acttctaattctcctgcagtaacaccaacagtaatgaataacagaaacacagaggatagc
acaacagcttttgttattagcaaacacaacatattaaggtcttatagaggagacttctgc
acttctcagcctgaaacagacccactgtccagccactatcaaacaggcttctgggcctgt
gacctagaagaacaaaaagaccagtcactgagggcttcgctccacgacaatgaacgcctc
accagaagtgaaacagagaaacagattttaattactgagagcacccaaaggagcagaagt
aatcgaattagacgtggaatgatggccggaccaatagctagcacagcgcaggattcaaac
aaaaaaaggcagaatcgaaagctcgaaggaccccatccgctgctaaaagaagttgaagac
aacaggcggtctgtggatggggttttagtggctgggaaacataaaaaaagcccagaaagc
agccaaatacactcagctgactgtgttgaagggcaatgggagatgtggagtgcaccagag
agattgccgagggagaacagctttgaaaaagtgcaacaagacgtacggaagactacaaaa
gtgaagtctttgtccagtccaaatgtggcagatttggatgtgtctgagatggttttagat
gacattgatgatgatgaggatctgggagtactctccaaagtgtcctttcaccgaactgtc
gtagagcacagctatgcaggctaccccatggacctacacaccgccatggaattgaaagct
gttcttctgggtaccagcctaaattgtttcagtgttgaatggagaaatcagggtctcacg
ttctcagaaacgcatgacctgagatacggaatcgtgcagaaaaagggtggcccttgtgga
gttctggcatccttccaagcctttgttctaaagaaactgctctttgaaaacactgagagc
agcagtataggccttcagaggttaagaccttccaattctaccagaagaaagtgtcttgtt
ttagcggcggcggaaatactttggcgggctggcgaggaaaaacaagccacagtagcaata
aattcaggaaggaatcatttcaccccggcaggacactacaaatctgaaggagttcttgaa
aagataacatgtttcactctggataacttcaaggacctgcagttgcttctggagcggcat
attgatcagtttgagactggggcattaggatgccttctgctcagcatatctgctgttctc
tctcgaaccattacaaaagtaagagaggatatggacgtgcacaccaacacactcattgga
gcccatggctactgcacacaggagctggtaaatctgttgctctgcggcagggcagtttct
aatgtctttgacaatgacatagagctggattcaggcaacggcaacatgactctactgaag
ggagtcaaagacccctgtgacgtaggcctgctgtccctgtttgaacactataacatctgt
aaggtgggagcttacctaaagactccccattaccctatctgggtggtgtgcagtgaaagc
cacttcagcgtgctgttcggcctgcagagggagctgttgaccaatcaggacaaaggcctg
gagtttgacctctactattacgatggactggccaatcaacaggaggagatccgcctcact
gtctttgttggcaaatcggccctcagctatcaagatgtcgacactgatctcattcctccg
ctggagcactgcatccgaacaaggtggaaagatgcatttgtcaactggaacgacacagag
cctattctctga
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