Notothenia coriiceps (black rockcod): 104965947
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Entry
104965947 CDS
T04920
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104965947
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRRCT
Motif
Other DBs
NCBI-GeneID:
104965947
NCBI-ProteinID:
XP_010793320
UniProt:
A0A6I9PZ08
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MQWVALTVALGCVCMSRASHTPTPTPTSTHTPLVDNSEEEVDEPCFEPCTCEVKEGVLHV
HCDGRSFTNVSQVSQSWVRPFKLNIQRNSLRRLYSNGFQHLGNAVSINLGNNALQDIKVG
AFNGLAKLRRLYLHENKLEVFRNDTFAGLEALEYLQADYNVIKRIDSGALRFLYKLRVLI
LNDNLIPILPAHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWNCGCE
AVQLQQWLGQIPYTAVVGDVTCEYPFHLHGKDLREIPRKELCADLPDKEIQAEVGGPSAG
SQPQPLPPNSKPNSHPGRVRPTKPSSMVHGRQNTHTSSTSSSSSSAERKERQPRPTKRPR
PSRTSPTARSLMPNQNPPVAGYQTRPPIPIICPLGCTCNLHISDLGLTVNCKESGFLNVS
QLTPRPLNGRKLYLSGNIIQRIYSTDFWNFSSLDLLHLGNNRISYLQEGAFSSLTSLRSL
YLNGNNLERLSPPMFLGLQDLRYLYFEYNEIHEINPGTFNSMPSLQLLFLNANLLQSLPL
GVFSGVNLARLNLRNNHLLLLPMEGVLEHLTGLRQVDLQQNPWECTCEAASLKRWLEGLS
AVVVVGEVVCHSPEKTEGVDLRSLSMELLCPELEPPEDEGLEEQTATSTGAASGVSEGYP
GSGLGPLIPPGKDSIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRRQGEVDLA
GIQMECGIFTEQTHHHHHHHHHSLPETPPLPAAENNHVYDTILPPEAGSKGPGPAAAPHM
CSNPIYKEEQEVKQRPQFAASKDSEGRYCPAAEKEREWTLEASSSSINTVTGAMGPLPGL
HGNGMLCPTVIDSQGPTPKVELVDCLFRLPAPEFRDLPDRYARPPPRYPHPQDSKQEARL
DQTLVVSTGSSTAGGSSQSEQGVGDQRARLRITPDYMEVLDRSYQF
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtcgctctgacagtggccctagggtgtgtgtgtatgtcccgggcgtcacac
acccccacccctacccccacctccacacacactcctctggtggacaactcggaggaggaa
gtggacgagccgtgcttcgagccgtgcacgtgcgaggtcaaagaaggcgtgctgcacgtg
cactgcgatgggcggagcttcactaatgtcagccaggtgtcacagtcgtgggtccgccct
tttaaactcaacatccagaggaactctctgaggcgtctctatagtaacgggtttcagcac
cttggcaacgcagtgtcgataaaccttggcaacaatgcactccaggacatcaaagtggga
gctttcaacgggttggccaaactcagacgcctgtacctccacgagaacaagctggaggtc
ttcagaaacgacaccttcgctggcttggaggccttggaatacctccaggccgactacaac
gtgatcaaacgaatcgacagcggtgctctgaggttcctctacaagctccgggttctcatc
ctcaacgacaacctgatacccatattgcctgctcatctgttcagatctgtgtctctgact
catctggacctgcggggaaaccgtctgaagagcctggcatatgctgggaccctggagtac
gtcgggcgctccctgatggagctacagctggaggagaatccctggaactgtggctgtgag
gcggtgcagctccagcagtggctgggtcagatcccctacacggctgtcgttggggacgtt
acctgcgaatatccctttcaccttcacggcaaggacctgagggaaattccccgcaaggag
ctgtgcgctgacctcccggataaagagatacaagccgaagtgggtggaccatcagcagga
tcacagccccaacctttacccccaaactctaaacccaactcccatccggggcgggtccgg
cccactaaaccctcctccatggtccacggccgccagaacacgcacacctcctccacttcg
tcctcctcttcctcagcggagaggaaagagaggcaaccgaggcccactaaaaggcctcga
ccctccaggacatcccccacagctcgcagtctgatgcccaaccagaatccccccgtggct
ggctatcagacacgaccccccatccccatcatttgtcccctgggttgcacttgcaacctg
cacatctccgacctgggtctaaccgtcaactgcaaggagagcggcttcctcaacgtttcc
cagctcacacctcggcccctcaacggccgcaagctgtacctgagtggaaacataatccag
aggatctatagcacggacttctggaatttctccagcctcgacctgcttcacctggggaac
aaccgcatctcgtacctccaggagggggccttctccagcctcaccagcctgcggagccta
tacctgaacgggaacaacctggagaggctcagcccccccatgttcctggggctgcaggat
ctgaggtacctttatttcgagtacaacgagatccatgagataaatcctgggactttcaac
tccatgccgtccctgcagctgttgttcctaaacgccaacctgctgcagagcctcccgctc
ggtgtgttttctggagttaatctggctcgactcaatctgagaaacaaccaccttctgctg
cttcctatggagggcgtgctggaacacctcaccggactgcgacaggtggacctgcagcag
aacccgtgggagtgcacctgtgaggcagcgtcgctgaagcgttggctggagggtctcagc
gcggtggtggtggtgggagaggtggtctgccattccccggagaagaccgaaggagtggac
ctccgctccctctccatggagctgctgtgtcccgagctggagcccccggaggacgagggg
ctggaggagcagacagccacctccacgggggcagccagcggcgtgtcggagggctacccc
ggctccgggctgggccccctgatccccccggggaaggattcaatccctctttcggtgtta
gtgctcagcctgctggtgttgtttgtgtcggcattcttcgcagcggcggcactaatcgcc
tacgccctgaggaggagggacaagctgccgttccgccgccagggagaggtagacttggcg
ggcatccagatggagtgtggcatcttcaccgagcagacgcaccaccaccaccaccaccat
caccacagcctcccggagacgccgcccctgcccgcggccgaaaacaaccacgtctacgac
accatccttcccccggaggcggggtcaaagggtcccggcccggccgcagccccccacatg
tgtagcaaccccatctacaaggaggagcaggaggtgaagcagcggccacagtttgcagct
tccaaagacagcgagggaagatactgcccggcggcggagaaggagagggagtggactcta
gaggcgtcctcgtcctccatcaacaccgtcacaggagcgatgggacccctgcccggtctc
cacgggaatggcatgctctgccccacggtgattgacagccaaggccccacccctaaggtg
gaactggtggactgcctcttcagactccctgctcccgagttcagagacctgccagacagg
tacgcgaggcccccgccccgctaccctcacccccaagactccaaacaggaagccagactc
gaccagacgctggtggtctccaccggcagctccacggcaggcgggagcagtcagagcgag
cagggagtgggagatcagagagccagactgaggatcacacccgactacatggaggtgctg
gacaggtcctaccagttttaa
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