Notothenia coriiceps (black rockcod): 104965963
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Entry
104965963 CDS
T04920
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104965963
04082 Neuroactive ligand signaling
104965963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104965963
Ion channels [BR:
ncc04040
]
Ligand-gated channels
GABA-A
104965963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
104965963
NCBI-ProteinID:
XP_010793339
UniProt:
A0A6I9PQM9
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MLILKVDQGFLVVGCLRGMAFLLTCLFLSCYSVSSVWGNKPVDTNIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQSWIDERLKFEGPIEIM
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPQSSVEVPEESSSLLQYDLIGQTVSSERLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA
MKVAAQEAAAAAATPTSATGIDGDLSSVDASNVLKKRMNSALLFERPSKTFPNPPVNAQA
FLQQGSAVPDNNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDPV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttctagttgtgggctgtttgcgaggcatggct
ttccttttaacttgcttatttctgtcctgttacagtgtgagcagcgtctggggaaataaa
cccgttgataccaatatttatttggataacatcacgcgcatattggatagattactggat
ggctatgacaacaggctgcgacccggatttggaggtccagtcacagaggtcaaaactgac
atttttgtcaccagctttggaccggtttcagatgttgagatggaatacaccatggacgtg
ttcttccgtcagtcatggatcgacgaacggctgaaattcgagggccccattgagatcatg
cggctcaacaacctgatggtcagcaagatctggacgccggacactttttttcggaatggc
aagaggtccatctctcacaacatgaccacccccaacaagctgtttcgcatcatgcagaac
ggaactatcctctacaccatgagattaactataaatgcagagtgtcccatgcgtctgatg
aacttcccgatggatggccatgcctgcccgctcaagtttgggagttatgcttaccccatc
agcgagattgtgtacacttggaagaagggccctcagtcctctgtggaagtgcccgaagaa
tcctccagtctgctccagtacgacctcatcggccagacagtgtcaagcgagaggctaaag
tccaacacaggtgaatatgtcatcatgacagtccacttccacctgcaaaggaaaatggga
ttcttcctgattcagacttacattccctgtattatgactgtcatcctggcccaagtgtct
ttctggattaataaggaatcagttccagctcggactgtgtttggtattaccactgtcctc
accatgacaacgctcagtatcagcgctcgacactccctccctaaagtttcttacgccaca
gccatggattggttcattgctgtttgtttcgcctttgtattctccgccctaattgagttt
gcagccgtgaattacttctccaccctgcaagctaaccgagagttgaggaaggcagcagcc
atgaaggtggcggcccaggaggcagcggctgcagcagctacaccgacctcagccacaggg
attgacggagatctttcctcagtggatgcgagcaatgtgctgaagaagaggatgaactct
gcccttctgtttgaacggccttccaaaacatttcccaacccacccgttaatgcccaagcc
ttcctgcagcagggttcggctgtaccagacaacaacgttctgaccggcaccagcatcatc
gacaaatactcccgcatcctcttccctctttcctttggcgcctttaacctggtctactgg
atcgtctatctcactaaggacacaatggagatgtcaagggaccctgtttaa
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