Notothenia coriiceps (black rockcod): 104965974
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Entry
104965974 CDS
T04920
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104965974 (gabra1)
04082 Neuroactive ligand signaling
104965974 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104965974 (gabra1)
Ion channels [BR:
ncc04040
]
Ligand-gated channels
GABA-A
104965974 (gabra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
104965974
NCBI-ProteinID:
XP_010793351
UniProt:
A0A6I9PY80
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MKGPHIATMGGRSRTAFLCLWASLLVANSVLGGKSSGTNGMTDEQKDNTTVFTKILDSLL
DGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHEMEYTIDVFFRQSWKDERLKFKGPMAV
LRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHL
EDFPMDAHACPLKFGSYAYTQAEVVYVWTRGADQSVVVAEDGSRLNQYDLMGQHVNSGVV
QSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV
LTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVV
PEKQKKKKESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPLPSEPKEEPKPKP
PEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKNPKLTGMGH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtcctcatattgcaactatgggtggacggagcaggacggcctttctgtgtctg
tgggcttccttacttgtggccaacagcgttctaggtgggaaaagctctgggacgaacggc
atgacagatgaacagaaagataacactacagtgttcaccaagatcttagacagccttcta
gatggctatgacaatcgcctcaggccaggactgggagagcgtgtaactgaagtcaagact
gacattttcgtgactagtattgggccagtttcggatcatgagatggagtacactattgat
gtcttcttcagacagagctggaaggatgaaaggttaaagttcaaaggccccatggccgtg
ctacgtctcaacaacctgatggccagcaagatctggacccccgataccttcttccacaac
ggcaagaagtccgtggctcacaacatgaccatgccgaacaagctgctgcgaattacagag
gaaggaactctgctgtacaccatgaggcttacagtaagagcagaatgtcccatgcacctg
gaagacttcccgatggatgcccatgcttgtccactgaaatttggcagctatgcctacact
caagcagaggtggtgtatgtgtggaccagaggggccgaccagtccgtggtggtggcggag
gatgggtccagattaaaccagtacgatctgatggggcagcatgtgaattctggtgtggtg
cagtccagcacaggagagtatgtcgtgatgacaacccacttccacctgaagaggaaaatt
ggttactttgtgatccagacatatctaccctgcatcatgacagtcatcctctcccaagtg
tctttctggctcaacagagagtctgtccctgccaggactgtctttggagtgaccactgtc
ctgaccatgaccactctcagtatcagcgccaggaactccctccctaaagtggcctatgcc
acagctatggactggttcatcgctgtgtgctacgcctttgtcttctcggctctcattgag
tttgccacagtcaactacttcaccaagaggggttatgcctgggatggaaaaagtgtggtg
ccagagaagcaaaagaagaagaaggagtccctcctcaagaaaaacaacaccacagcctac
ccagctgccactgctacagccttcgcccccaatattgccagggaccctggattggccact
attgccaaaagcgcccccccactcccctctgagcccaaggaggagccaaagcccaaacct
ccagaggcaaagaagacctttaacagtgtgagcaagatagacaggattgccagaatagcc
ttcccattgctctttggaacctttaacttggtctactgggcaacttacttgaataagaac
cccaaattaacggggatgggtcactaa
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