Notothenia coriiceps (black rockcod): 104965999
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Entry
104965999 CDS
T04920
Symbol
b4galt4
Name
(RefSeq) beta-1,4-galactosyltransferase 4
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00533
Glycosaminoglycan biosynthesis - keratan sulfate
ncc00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ncc01100
Metabolic pathways
Module
ncc_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
104965999 (b4galt4)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
104965999 (b4galt4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104965999 (b4galt4)
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
104965999 (b4galt4)
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
104965999 (b4galt4)
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
104965999 (b4galt4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
104965999
NCBI-ProteinID:
XP_010793395
UniProt:
A0A6I9PZ60
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MGFCSPVCKVFRRGKYILLFLISLSVLAWIANLSGETIKNASVSFATPQALVKGESLREK
LNALTATPDRLITPATKDECPQESPLLQGALKLSFESSLKRKDVESDNKAVIEGEFEPSD
CTARQSVAILIPHRGREKHLLYLLHHLHPFLQRQQLHYAIYIIQQAGDVTFNRAKLLNVG
YLEALKDFSWDCFIFHDVDLVPENDHNLYVCDKQPKHLVVGRNATGYKLRYKGYFGGVTA
MNKEQFFQVNGFSNNYWGWGGEDDDLRVRVELQKMKIVRPPADIARYTMVFHKRDSGNEI
NKDRMRLLGRTPLVWRKDGLNSCTYKTMSLERLPLYVNVTVDIGKPLS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctgttcgcctgtgtgcaaggtttttaggagagggaaatatattttgctcttc
ctcatctcgctgtccgtgctggcatggattgcaaatttgtccggtgaaaccataaagaat
gcttcggtttcatttgccacgccacaagctcttgtcaaaggagagagcctgagggagaaa
ctgaatgctttgacggcaacccccgatcgcttgatcactccagcaacaaaggatgaatgc
cctcaggagtctccactgctacagggagctttgaagctgtcctttgaatcctctctgaaa
cggaaggacgtggagagcgataacaaagcagtgattgaaggcgagttcgagccctcggac
tgcacagcgaggcagagcgtggccatcctcatccctcatcgcgggagagagaaacacctc
ctctacctcctgcaccacctgcacccctttctgcagaggcagcagctccactacgccatt
tacatcatccagcaggctggagatgtaacttttaatcgtgccaagttactcaatgtcggg
tatttggaggcgctgaaggacttcagttgggactgcttcatcttccatgacgtggacctg
gttcctgaaaacgatcacaatttatacgtctgtgacaagcagcccaaacacttggtggtg
ggccggaacgccacaggatacaagctgcgttacaaaggctactttggaggagtcacagct
atgaacaaagagcagtttttccaagtgaatggtttctcaaacaattactggggctggggc
ggagaagatgatgacctccgcgtcagggtggagctgcagaaaatgaagattgtgcgcccc
cccgctgatatagctcgctacaccatggtgtttcacaaacgggacagtggcaacgaaata
aacaaagaccgaatgagattgttaggacgtacgccgctggtttggagaaaggacggactc
aacagctgcacatataagacaatgtccttggagaggctccctctatatgtgaatgttacc
gtggacattggtaagccactgagttga
DBGET
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