Notothenia coriiceps (black rockcod): 104966020
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Entry
104966020 CDS
T04920
Name
(RefSeq) cadherin-related family member 5-like
KO
K16505
cadherin-related family member 5
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104966020
Cell adhesion molecules [BR:
ncc04515
]
Cadherins
Cadherin related
104966020
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
HCV_NS4a
Motif
Other DBs
NCBI-GeneID:
104966020
NCBI-ProteinID:
XP_010793422
UniProt:
A0A6I9PYD0
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MELKWKSQPVNVLLGCVVALCFCTLCPAERLCTVPPGPVTVPENSTLDVEVVKIDSSNDV
ELTLTVNPEDLFYLKGNALMVKKGLDYESLDSLTLTVWVQCSREDSISVNEPVEVLVENV
NDNPPNFAQSHYILEVNELTAVNSSLGLIEASDVDSEPLYYRLEPATDKYFRLENINTPK
IIVKSILDYDVVQKIPLVLHVQDTLNGSASNEPFFTSVATITVQVKDVDNRPPWFQPCLR
TNLGIAKLCVSTGYRGKVNLTEKEDGPLVLEPGPVFAKDGDKNRSEVISYRILRGNEGNI
FQIDEDTGNISMAKAADIVGPITLTVLASQVTNRDQFAVTQVTIEVMKKSRNPPRFEKER
YEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFAAGTNPDVKYEVQYSSYVNVTTDGFV
ILKRVVKTESFALQLRAVDSTTGEFGSAALSVQVIPAVAIPSPSNVGYRPGDMALLGLVM
AALLVLCLIVIGFLISRLWKGNGSMDKICECLGPCLKSDQHSGHRDSLQYTNDGFQTEGD
ASRGGGKRSNHVVPRRSTFPQARGRVMEGRNRNCSSCGVCSNHLPKGSPSVRTSKKGRGD
RDEYGMRSMANKQRRKEGQKTVWFKQSEDSSDIEVEIIPDTVGRVEEETEEELDMEGVVR
DPAAPLREAEGEKESESTEPNEEKDRGKEKGGEEKEG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaatggaagagccaacctgtgaacgttctcctcggatgcgtcgtggccctt
tgcttttgtacactttgtccggctgagagactgtgcacggttcctccgggccctgtgaca
gtccctgagaacagcacgctcgacgttgaggtggttaagatagactccagtaatgatgtg
gagctgaccctcactgtgaaccctgaagatctgttctacctgaaaggaaacgctctgatg
gtgaagaaaggcctggactatgagtcgttggatagtttaactctgacggtgtgggtgcag
tgcagcagagaagattccatatctgtgaacgagcctgttgaggttttagttgaaaacgtg
aacgataaccctccaaactttgcacaaagccattacatactggaggtgaatgagctcact
gcagtcaactccagtttgggactgatagaagcctcagatgtggattcagagccgctgtac
tatcgcttagagcctgcaacagataaatatttccgactggaaaacatcaacactccaaag
ataattgttaaaagcatcctggactatgatgttgtgcagaagatccctctggttttacac
gtgcaggacacgctcaacggctcggcctccaacgagcccttcttcacgtcggtggccacc
atcacggtgcaggtgaaggacgtggataaccgtccgccgtggtttcagccatgcttgagg
accaacttgggaatcgccaaactgtgtgtgagcaccggctacaggggcaaagtcaacctc
accgagaaggaggacgggccgttggtactggagccgggtccggtgttcgctaaggacgga
gacaagaaccggagcgaggtgatcagctacaggatcctccgaggaaatgaggggaacatt
ttccagattgacgaggacacaggaaacatctccatggctaaagctgctgacattgtcggc
ccaataactcttactgttctggcgtctcaggtgacgaacagggatcagtttgctgtgaca
caggtgaccatcgaagtgatgaagaaaagcaggaaccctcctcgctttgagaaggaacga
tatgaaggctttatctacagcaactctgttcccgagagcatgatcctcagagaccggagc
accaaccggcccttcagggtccgagcgcgggacgaggacttcgccgctggtacgaatccc
gatgtgaagtatgaggttcagtacagcagctacgtcaacgtcaccaccgacgggtttgtt
attttgaagagagtcgtgaagacggagtcttttgcacttcagctcagagctgtggactcg
acgacaggggagtttggatcagctgccctctctgttcaggtcattccagcggtggccatc
ccgtccccctctaacgtcggctaccgtccgggcgacatggcgctgctgggtctggtgatg
gcggctctgctggttctctgcctcatcgtgattggcttcctgatttcccgcttgtggaag
ggaaacggcagcatggacaaaatatgtgagtgcctgggcccctgcctgaagtcggatcag
cactccggccacagggactccctgcagtacaccaatgacggcttccagaccgagggcgac
gccagccgcggggggggcaagcgctccaaccacgtggtccccagacggagcaccttcccc
caggctcgaggccgggtcatggagggacggaaccgcaactgctcctcctgtggcgtctgc
agcaaccacctccccaaggggagcccctcagtgaggacgtccaagaagggaaggggagat
agggacgagtatggcatgaggtccatggctaacaagcagaggaggaaggagggccagaag
accgtgtggttcaagcagagcgaggactcctccgacatcgaggtggagattatcccagac
actgtgggccgggtggaggaggagacggaggaggagctggatatggagggggtggtcaga
gatccggctgccccgctgagagaggctgagggggagaaggagagcgagagcacagagccc
aatgaggagaaggaccgcggtaaagagaagggaggcgaggagaaggagggctga
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