Notothenia coriiceps (black rockcod): 104966326
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Entry
104966326 CDS
T04920
Name
(RefSeq) sodium channel and clathrin linker 1-like
KO
K25400
sodium channel and clathrin linker 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncc03037
]
104966326
Cilium and associated proteins [BR:
ncc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104966326
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_31_3rd
Glyco_hydro_31_2nd
DUF4365
Motif
Other DBs
NCBI-GeneID:
104966326
NCBI-ProteinID:
XP_010793816
UniProt:
A0A6I9Q4E5
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MGGQRQDPVAWDDNFAQVSRDVLNIRYTLLPYLYTLMFEAHTKGSTVVRPLLHEFANDRN
TWDIHKQFLWGPALLITPALDKGVTNVDGYVPNTRWYDFYTAKDVGVRGKMVSMPTPLDH
INLHIRGGYILPWQKPENTTLYSRRNPLGLIVALSDSGTAQGSFFWDDGEGIGFHFKANR
LLSHPQTPHPSFLPRLVPLPLLANIEASRWGTDYPLLPDLDSEVSDLRQDALSVIMASDL
VLSSPPLGPGSTQCLLCLARVALSASVEIPELWGDPQPKSQLLQCLLKAPQYEVRELALE
GVLRRLQEEEEDEEERGHQWLDQTTLSNLTSLALHETHPQCLAKTNQQFLKTVTEQSTEM
EDLHSQHRQSKAELRTATAKVDEMTKVLQSFQDQMQRREEDVAEAQGREDAADRRLQQLQ
AALSQLEARLQAATQEAEAVRRDQTVWERKVGELQNRCSTLEEEKYEALAKVRESVQVAE
EATLQREQVLLREKQKKDELEKTKEAIKQLIQDAAVRTRKESVFSSFGNKGTCLLGTLEV
DNVRKQCNVQIHRMAEELSALQLECADKESQIERSLRERKAVEEELEKVYKEGRAEPEFR
KIDALHQRCLDAERMKEDISLTLQSTKNRLKKMGMDYSEEISRCQEEVQRLQSSLVSARD
DCVGVSEERLQLQRENLQLHKDMDELRKATMLVQKKAKQQLAQMEQEYSLKEQGLDARVQ
ELEDSSRSSCADLTRLLAAQQKSTQRWKEEAKNLVQAFETKMTGFKGELNRQKQRSHELE
MQLEKDHNTVAEYERQLAEYQEKASRLQRRLTQSEQKASTATQQLSMLASQRRKTAMVDP
DTL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtcagagacaagatcctgttgcttgggatgacaatttcgcccaggtttcccgg
gacgtcctgaacatccgctacaccctgctgccctacctgtacacactgatgttcgaggct
cacaccaaaggaagcacagtagtcagacccctcctgcacgagtttgcgaatgatagaaac
acatgggacatacacaagcaattcctctggggtccggccctccttatcacccctgccctt
gataagggagtcactaatgtggacggctatgttcctaacacacgctggtatgacttctac
acggccaaagatgttggagtgcgtggaaaaatggttagcatgcctacccccttggatcat
atcaaccttcatatcagagggggatacatcttgccttggcagaaaccagagaataccacc
ctttacagccggaggaatcctttaggactgatagttgccctgagcgacagcgggactgct
caaggatcgttcttctgggacgacggagaaggaataggcttccatttcaaagcgaaccgc
ctgctgtcccatccgcagaccccccatccctccttcctcccccgccttgtacccctaccc
ctcctggccaacatcgaggcctcaagatggggcacagattaccccctcctgcccgaccta
gattcagaggtcagtgatctccgtcaggacgctctctccgtcatcatggcctcagacctc
gtcctctcctccccccccctggggcccggcagcacccagtgcctgctctgcctggctcgg
gtggccctcagtgccagcgtggagatccctgagctgtggggggaccctcagccgaagagc
cagctccttcagtgcctccttaaggcaccgcagtatgaggtgagggagctcgctctggag
ggggtcctgaggaggctgcaggaggaagaggaggatgaggaggagagggggcatcagtgg
ctggaccagaccaccctgtccaacctgaccagcctggctcttcacgagacacacccccag
tgtctggctaagaccaaccaacagtttctgaagactgtgacggagcagagcacagagatg
gaggatctacacagccaacacaggcagtccaaggctgagttgaggacggccacagccaaa
gtggatgagatgaccaaagtgctgcagagtttccaggaccaaatgcagagacgggaggaa
gatgtggcagaggctcagggtcgagaggacgcagcagacaggcggctccagcagcttcag
gcagccctgagccagctggaggccagactacaagctgccacccaggaggctgaggcggtt
cgcagggatcaaactgtgtgggagagaaaggtgggggaacttcaaaatcgctgcagcacc
ctggaagaggagaagtacgaagccctggccaaagttagagagagtgttcaggtggctgag
gaggctacattgcaaagggaacaggtcctgttaagagagaaacagaaaaaagatgagctg
gagaagacaaaggaggccatcaaacagttaatccaggatgctgcagtacgcacaaggaaa
gagtctgttttttcttcctttggtaataaaggcacatgcttgcttggaacattggaggtg
gataatgtgcgcaagcagtgcaacgtccaaatccaccgtatggctgaggagctgtctgcg
ctgcagcttgagtgtgcagataaagagtctcagattgaaaggtccctacgagagaggaaa
gctgtagaagaggagctggagaaggtgtataaagaggggcgcgcagaaccagagttcagg
aagattgacgctcttcaccagaggtgtctagatgcagagaggatgaaggaagacataagt
ctcactctgcagagcaccaaaaacagactaaaaaagatggggatggactacagtgaggag
atctcgcggtgtcaggaggaagtgcagcgcctgcagagctctctggtttcggcccgggac
gactgtgtcggcgtcagcgaggaacggctgcaactgcagagagagaacttgcagctccac
aaagacatggatgagctgcgcaaggctaccatgctggtccaaaagaaggccaaacaacag
ctggcacagatggagcaggagtacagcctgaaggagcagggattggacgcacgcgtgcag
gagctggaagatagcagccggagctcctgcgctgacctgacgcgcctcctcgcggctcag
cagaaaagcacccagcgctggaaggaggaggccaagaacctcgttcaggccttcgagact
aaaatgacaggcttcaaaggcgagctgaatcggcagaagcagcgttcacatgagctggag
atgcagctggaaaaagaccataatactgttgctgagtatgagaggcagctagcagagtat
caagagaaggcgagtcgtctccagagaaggctgacacaatctgaacaaaaggccagcact
gctacacaacagctgagtatgttggcgtcacagcgaagaaagacagccatggtggatcca
gacactctataa
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