Notothenia coriiceps (black rockcod): 104966461
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Entry
104966461 CDS
T04920
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
104966461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104966461
Membrane trafficking [BR:
ncc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104966461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
RGS
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
104966461
NCBI-ProteinID:
XP_010793949
UniProt:
A0A6I9PSH6
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
HATEILQEKCVEQEEVKLQELMEEQLRIPSLSLGERIERAKRRANQVRVKIQQDLDGTRS
DCATSYVIAGEGRLSMDSSEGDVEAFESPHSSPSSSFRTPQHRRPNSDTHTLSDSGGKAQ
IIGPEEEDEEDDGYAFNEMDGPFQDIELLKSRPAHMAVFMRYVFTQLLDPNPLLFYLSVE
AYLGSSPKDARALAPQICSHFLDPDAPLKIKVREEYLTDIEGRLHASEDIRGPLSELQQQ
VLPDIQDQIQDYRNKQMMGLGSLFGEGDLQQLDGDPVKERQVVDRQVTALWEILSKHEED
RSSPLASAVHLYLRHSGIKLRDSKVFPGLSTEKEKWLAFLKTKKPSGPKKEKDGEDKKRN
PILKYIGKPRNSSQSTFHVPLSPTEVRPGSVRNIIQQFENHTETGEEGGDPADPPRLSTS
SLGEDSMESPAVSVRLARSESLKAQGEGRRRGVVSGTESVPRSRSDVDMEDCGEEREGPG
LRPLQHSASSSASSSSARSLENPTPPYTPRSRRSLCEAMKKRREAPTVQDIGDVMLARFE
GTAGDEFQEQASQLCSQQSQAQELIKNKQRKDPRFAHIIQECEASHHCRRLQLKDLLVSE
MQRLTKYPLLLDNIIKHTDAGSSDLPSLQRAHACCRGILLAVNEDVRETEHRQRLSQYQR
RLDAAPLFKGLDLTTKRMIHEGPLTWKVNKDKQIEIQALLLSDSLVLLQRGPDDRLLLRY
PSRWLGGGVGGSGDSKTFFSPLVKLDSLLVRSVATDNKALYLISTTERQIYELVAGTASE
KNTWKDLLEKTISSSGGSSPLINHGSIPTSSSSLRSASPVSTSSNVFADNSITEQSDSME
THSSNDDIVLSAHTPTDQSEAFICGEGEAVGVAEAALQDVETLRQLILRDLDEDGWSHNS
DDTPTNETTNERSSFPERQRPESLETVLNFSINELEAEPEEEAPPLDAEQPSSVQVVRKA
VVAGPSSSSSVPDDITADVTLPSDQSHEPRGEATAQGNMFYLVLPTAQGESATDDLHDLN
DPPTPTASHFPQPLEEVISPQPEEEARACFSNQSEAMELEQEEETGQSPQSHVIKNVDEI
FHTIEGLTSKLRQLKDIENSHHTLLKTLREPLVNQEPEDQQCPSATVSRTPSLDRGSGDG
KEGSPAEPKIQSTGF
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
catgccactgagatactccaggagaaatgcgtcgagcaggaagaggtgaaactacaggag
ttgatggaggagcagttgagaatcccgtcgttgtcacttggagaacggatagaaagagca
aagaggagagctaaccaagtcagggtcaagattcagcaagatctggacgggacgcgatca
gattgtgccacgagctacgtcatagcaggagaaggtcgtctatcaatggactccagcgaa
ggcgacgtggaggcttttgagagtccccactcctccccctcctcctccttcaggacccca
caacaccgccggccgaactccgacacacacaccctgtctgactcgggcgggaaggcgcag
atcatcggccccgaggaagaggatgaagaagatgacggttatgcatttaacgagatggac
ggtccgttccaggacatcgagctgttgaagtcacggccggcacacatggcggtgttcatg
agatacgtcttcacacagctcctggaccccaaccctctgctgttctacctgtcagtggag
gcctacctgggctccagccctaaagacgctcgtgcgctcgcacctcagatctgctcccac
ttcctggacccagatgctcccctgaaaatcaaagtacgagaggagtatctcacagatata
gagggtcggcttcacgcctcggaggacatcaggggtcctctgtccgagctgcagcagcaa
gtgttgccggacatccaggaccagatccaggactacaggaacaagcagatgatgggcctc
ggctctctgttcggagaaggagacctgcagcagctggacggagacccggtgaaagagcga
caggtggtggacagacaggtcaccgccctctgggaaatactatcaaagcacgaagaagac
agaagttctcccctggcgtcggccgttcacctttacctgcggcattcaggtatcaagcta
agagactccaaggtcttccctgggctgagcacagagaaggagaagtggctcgccttttta
aaaacgaaaaagccgagtggtcccaagaaagagaaagatggagaggataaaaagagaaat
cccatcctgaagtacatcggaaaaccccggaactcctcccagtctacattccatgtcccg
ttgtcacccaccgaagtccgtcctggcagtgtgaggaacatcattcagcagtttgagaac
cacacagagacgggggaggaggggggagaccccgcggaccccccgaggctctccaccagc
agcctgggagaggacagcatggaaagccctgcggtctcggtgcgtctggcacgcagcgag
tcgttgaaggctcagggtgagggccgacggcggggcgtcgtctcggggacggagtctgtc
ccacgctctcgtagcgacgtggacatggaggactgcggggaggagagggaggggccgggc
ctcaggccgctgcagcacagcgcctcgtcgtccgcgtccagcagctctgcacggtctcta
gagaaccctacacccccatacacccctcggtctagacgcagtctatgcgaggcgatgaag
aagcgaagagaagcccccaccgttcaggacatcggggacgttatgctggccaggtttgaa
gggacggcgggagacgagtttcaggagcaggcgtcgcagctgtgcagccagcagtctcag
gctcaggagctcatcaagaacaagcaacgcaaagaccctcgcttcgctcacatcatacag
gagtgtgaagcgagtcatcactgtcggaggctgcagctcaaagacctgcttgtgtctgag
atgcagagactcaccaagtaccccctgctgctggacaacatcatcaaacacacagacgcc
ggttcgtcggacctcccctcacttcaacgtgcccacgcttgttgccgagggatactgctg
gcggtgaacgaggacgtcagggaaacggagcaccggcaacgcctcagccaataccaacgc
aggctggacgctgcgcctctattcaagggtctggacctcaccactaagagaatgatccac
gaaggtcctctcacgtggaaagtcaacaaagacaagcagatagagatccaggcgctgctg
ctgtctgactccctggtgctcctgcagcggggcccggacgaccggctgctgctcaggtat
ccgtcccgctggctgggggggggcgtggggggcagcggggacagcaagacgttcttcagc
cctctggtgaagctggactctctgctggtccgctccgtagctacagataacaaagccctc
tacttgatcagcaccacagagaggcagatctacgagctggtggccgggacggcgtcagag
aaaaacacctggaaagatttacttgaaaagaccatctcatcgtccggcggttcatccccc
ctgatcaatcacggatccatacctacatcctcctccagtctgcgcagtgcgtccccagtg
tcaactagcagcaatgtgtttgcagacaactcaataacggagcagtcagattccatggag
actcattcctccaacgacgacattgtgctctcagcacacacacctactgaccaatcagaa
gctttcatctgcggtgaaggagaagcagttggtgtggccgaggccgctttacaggacgtt
gaaacactaaggcagctcattttacgagatttggacgaggacggttggagccacaattca
gacgacacgcccaccaacgagacgaccaatgagaggagctcgttccccgagaggcagcgg
ccagagtctttggagactgtcctcaacttcagcatcaacgaattggaggcggagcctgaa
gaagaggctccgccgcttgacgctgagcaacccagcagcgttcaggtcgtgaggaaagct
gtggttgcgggtccttcttcttcttcttctgtccctgacgacatcactgctgatgtcaca
ctcccctccgaccaatcacacgagccgagaggcgaggccaccgcgcaggggaacatgttc
tacctggtactgcctacagcgcagggagagagcgccaccgacgacctccacgacctcaac
gaccctcctactcccaccgccagccacttccctcagcctctggaggaagtgatatcaccg
cagcccgaggaagaagcacgcgcctgcttctccaaccaatcagaggctatggaactggaa
caggaagaggaaacgggccaatcgccgcagagccacgtgatcaaaaatgtggacgagatt
ttccacaccatcgaggggctgacgagcaagctgcgccagctgaaggacatagagaattcc
catcacacgcttttgaaaaccctcagagagccgttagtcaatcaggagccagaggaccag
cagtgtccgtcggcaaccgtctccagaacgccgtctctggatcgcggctcaggggacggc
aaagagggcagtccagcagagcccaagattcagtcgacgggattctga
DBGET
integrated database retrieval system
