Notothenia coriiceps (black rockcod): 104966578
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Entry
104966578 CDS
T04920
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04621
NOD-like receptor signaling pathway
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104966578 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104966578 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ncc04054
]
104966578 (nod1)
Pattern recognition receptors [BR:
ncc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104966578 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_4
AAA_16
NPHP3_N
AAA_22
ABC_tran
RsgA_GTPase
AAA_29
Roc
Motif
Other DBs
NCBI-GeneID:
104966578
NCBI-ProteinID:
XP_010794065
UniProt:
A0A6I9Q0J4
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MGQREEVRPSCLSLLTYHRELLVSRLRSVACILDNLLASGFVCEEDVEIVQRTATKMDKV
RKILELVQCKGEEACEYFIYIIYKVCDAYVDLQPWLKDINFNPSSEVALLDVVNTDPISR
FSEKLRRGMSQDTSFIMSYGQREETRLEELYTDTLMELLNDCNESLGFLESLHTLLGDHA
DFNPQGETISVMGDAGVGKSILLQKLQNLWSNKELQTDAIFFFKFRCRTFSLFKDSEQMS
LRELLFKHNCCPDHDPDDEVFEFILRFPEKVLFTFDGYDEIQMNDLMNVAEVGSTDVKAH
PLQLLISLLCGKLLKGSQKVLTARTGTEIQSRVIRKKVALRGFSPDHLNTYIHLHFKKQE
HRELVSVQLDASPHLCGLCSTPLFCWIVFKSFRHLHTMHDSFHLPDTCITLTDIFLLLSE
VFLSRSAAPAPSLLKKSTRCASETFRAGLRSLTAFAKLALQGMERGSFIWSQEQMSECGL
TEEDLSLGFLRPVGEFDASGGAATFEFLHVTLQSFLAAFALVLDEQAPAGSILKFFTECS
RKRNTFCVPFQVCISGSSKSREKNPFATNEHLQFTNLFLCGLLSKAHIGLMEHLVSPMLL
KKKRALLKSYLSTSVKSHLHGLPHYDGEEGKKVHVLPNFLWMLRCIFETGSRDIAQTTAR
GIKADFIKLGYCNVFSGDCTAINFVLQHRHKVLGLDMDNNNISDYGVKQLKPSFSKMTVV
RLCVNQLSDSSIEVLAEELCKHKVVEILGLYNNHITDVGAKLVAQIIQECPKLRVVKVGK
NRITGVGGRYLASAIQRSSSIFDVG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagagagaagaggtgaggccgtcctgcctctccctcctcacctaccacagagag
ctgctggtgtcccggctccggagcgtcgcctgcatcctggacaacctgctggcctctggc
ttcgtctgtgaggaggatgtggagatcgttcagcgaactgccaccaagatggacaaggtg
cgtaaaatcttggagctagtccaatgcaaaggtgaggaggcctgtgagtacttcatttac
atcatttacaaggtatgtgatgcatacgtagacctccagccatggctgaaagacatcaac
ttcaacccaagcagtgaagtagcgctgttggacgtggtgaacacagatcccatcagcagg
ttcagtgagaagctgaggcggggcatgagccaggacaccagcttcatcatgtcgtacggc
cagcgagaggagacccgtctggaggagctgtacaccgacacgctgatggagctgctgaac
gactgcaacgagagtctgggcttcctggagagcctgcacacgctgctgggagaccatgca
gacttcaacccccagggggagaccatctctgtgatgggggatgccggggtggggaaatcc
atcctgctgcagaagctccagaatctctggtccaacaaagagctacagacggacgccatc
ttcttctttaagttccgctgcaggacgttcagcctcttcaaggactcggagcagatgtcc
ctcagagagcttctgttcaaacacaactgctgccccgaccacgacccggacgacgaggtg
tttgagttcatcctgcgcttccctgagaaggttctctttacgtttgacggctacgatgag
attcagatgaatgacctgatgaatgttgctgaggtgggctcaacagatgtaaaggcccac
cccctccagctactcatcagcctgctctgtgggaaactgctcaagggttcccagaaggtt
ctgacggcccgcacaggcaccgagatccagagcagggtgatcaggaagaaggtggctctg
cgcggcttctccccggatcacctgaacacctacatccacctgcacttcaagaagcaggag
caccgagagctggtgtccgtgcagctggatgccagcccccacctctgtggcctctgctcc
accccgctattctgctggatcgtattcaagagcttcaggcacctgcacaccatgcatgat
agtttccacctgcctgacacctgcatcacgctcacagacatcttcctcctgctgtccgag
gtgttcctcagccgctcagccgctcctgctccgtctctgctgaagaagagcactcggtgt
gcttccgagacgttcagagccgggctcaggtccctcacagcgtttgccaaactggctctt
cagggtatggagagaggaagcttcatctggagccaggagcagatgagtgagtgtgggctg
acggaggaggacctgtcgctgggcttcctgcggcctgtcggtgagttcgacgccagcggg
ggcgccgctacatttgaattcctccacgtcaccctgcagtctttcctggcagcgtttgct
ctggtgttggatgagcaggctcctgccggctccatcctcaagttcttcacagagtgcagc
aggaagaggaatacattttgtgttccttttcaagtctgtatcagtggctcctcaaagtcc
agggaaaagaatccatttgcgacaaatgaacaccttcagttcactaacctgttcctgtgc
ggcctgctgtccaaggctcacatcggcctgatggagcatctggtttctcctatgttatta
aagaaaaaacgggccttgctcaaatcctacctttctaccagtgtgaagtcccacctccat
ggattaccccactatgatggtgaggagggcaagaaggtccatgtgctgcccaacttcctg
tggatgctgcgctgcatttttgagacggggagcagagacatcgcccagacgacggccaga
ggcatcaaggcggacttcatcaagctgggctactgtaacgtgttctccggggactgcacc
gctatcaacttcgtgctgcagcaccgtcacaaggtcctgggcctcgacatggacaacaac
aacatcagtgactatggggtgaagcagctgaagccctccttcagtaagatgacagtagtg
agactgtgtgtgaatcagctgtctgacagcagcatcgaggttcttgcagaggagctgtgt
aagcacaaagtcgtggaaatcttgggcctttacaacaatcacatcacagatgttggagct
aagctggtggctcagatcatccaggaatgcccaaagctgcgagtcgtcaaggttggcaaa
aacaggatcactggtgtcggggggagatatctggccagcgcaatccagaggagctcttct
atattcgatgtggggtga
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integrated database retrieval system
