Notothenia coriiceps (black rockcod): 104966679
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Entry
104966679 CDS
T04920
Symbol
lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104966679 (lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104966679 (lrrc4c)
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
NGL family
104966679 (lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
LRR_NXF1-5
Mid2
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
104966679
NCBI-ProteinID:
XP_010794207
UniProt:
A0A6I9Q062
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MLNKMTSYQQQQTMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSACSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQIIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQIIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPSNHKGRYIGELDQNYFHCYAPVIVEP
PTDLNVTEGSAAELKCRANSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHEGFTTAVQQKVGPT
PSAGTWESVSLTSTTTTTVRTPLSTRATEKTYTIPVTEQGEEDLLNGLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHPTTRTIEIINVDEDCVTGGPGMEGHLTLPPL
EHEHLNHYNAYKTAYNHASTMNSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctatcagcagcagcagacgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctggtggtggcg
gggctggtacgtgctcagacgtgcccctctgcctgctcctgtagtaaccagttcagcaaa
gtcatatgcacccgacgaggcctgcgggaagtccctgatggcatctctaccaacacacgc
tacctgaatctgcaagaaaatcttattcagatcataaaggtagacagctttaagcatctg
agacacctggagatcctgcagctgagcaaaaaccacatacgcaaaattgagctgggggct
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccactatc
ccaaacggggcatttgaatacctgtccaaactaaaggagctttggctgaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattgcggaggttggacctt
ggggagctcaagcgcctctcatatatatctgagggggcctttgaagggctgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcggggaaccagctaactgtcatccgacccggctctttt
aaagggctcatccatttgcagaagctatggatgatgcatgcccagatccagataatagaa
agaaactcttttgatgacctgcagtcactagttgagctcaatctagcccataacaatctt
acccttttgccccatgatctattcacccctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacatcctatggctaagctggtggcttaaggagatg
gtaccagcaaacaccagctgctgtgcccgctgcagctctccatccaaccataagggaaga
tacattggcgagctggaccagaactactttcactgttacgctcctgttattgtggagccc
cccacagacctaaatgtgacagagggaagtgctgcagagctgaaatgcagagctaactcc
ttgacctcggtgagctggattacacccaatggttccatcatgacacacggtgcttacaag
atccgaatctcagtgctgaatgacggaactctgaacttcactaatgttaccatgcaggac
acaggcacatacacatgtatggtcagtaattctgcgggtaacacaacagcctctgccacg
ctcaatgtttcctctacagagaacagcagcttcagctacttcaccacagtgacagtggag
accatagaaacaccacatgaaggcttcaccaccgctgtgcaacagaaagtgggccctaca
ccttctgctggtacgtgggagtctgtttcactgacctctacaacaaccaccacagtccgg
accccactgtccacacgtgccacagagaagacttacacaatccctgtcacggagcagggc
gaggaggatttgctgaacggtttggatgaggtaatgaagacgaccaagatcatcattggt
tgctttgttgcaatcacactcatggcagcggtgatgctgatcatcttctacaagatgcgc
aaacagcaccaccagcagaaccaccacccaaccactcgcaccattgagatcatcaacgtg
gatgaggactgtgtaacagggggcccgggcatggagggccacctgaccctgccgcctctt
gagcatgagcacctcaaccattataacgcctataagactgcatacaaccatgcctccact
atgaactccatacacagctcagcgcacgaacctttgctaatccgggcaagctcaaaagac
aatgtacaagagacccagatctaa
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