Notothenia coriiceps (black rockcod): 104966684
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Entry
104966684 CDS
T04920
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104966684 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104966684 (mbd4)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104966684 (mbd4)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
104966684 (mbd4)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104966684 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
104966684
NCBI-ProteinID:
XP_010794213
UniProt:
A0A6I9PT99
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MMHTGCDFLLETGGDINNQSHNDKDDSCHTSTLPPGWIREVRQRKAGKTAGKMDVYITSP
QGQRFRSRASLHAFFIKNGEGNLEIDLFDFTASKDDAPTPSQLLPSQVKQKRRKKRNAGA
PQETKEDATEILDPPPNKSKKASSSLRSKTKDRKVKSACVKSFIKAPLTKEDDVKLQKSP
QRSGQLREKLLRLDPPSNQQHTLIVSKDEEADSRPSAPKLNVEPATESENEGEEERGRDE
LQIHIKGANKSNSDLEADAEDEEEEVLLPDTTGGSCIPVRDSQNRSKCGEHKRKTSPYFK
RKHPSDDLSPPRRKAFKKWTPPRSPYNLVQETLFHDPWKLLVATIFLNKTSGKMAIPVLW
QFFERYPSAEVTREADWKPLSELMKPLGLYELRAKTLVRFSDEYLTKQWRYPIELYGIGK
YGNDSYRIFCVDEWRVVKPEDHMLNKYHDWLWENHERLGI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatactggctgtgatttcctgctggaaaccggtggagacataaataaccaaagt
cataatgacaaggatgactcatgccacacttccacattgccccctggctggatcagagag
gttaggcagcgtaaagcaggcaagacagcaggcaaaatggacgtctacattacaagtccc
caagggcaaaggtttcggtcgagagcatccctgcatgctttcttcataaaaaatggagaa
gggaacctagaaatagacctctttgatttcactgcatccaaggacgatgctcccacccct
tcgcaattactcccctctcaagtgaaacagaagagaagaaagaaaagaaatgcaggtgca
ccgcaggagacaaaagaagatgcaacagaaatactggatccacctcctaataaatctaaa
aaagcctcttcctccctcagaagtaaaactaaagacagaaaagtaaaaagtgcatgtgtg
aagagcttcataaaagcgcctttaaccaaagaggatgatgtaaaactgcagaagagccct
cagaggtcaggtcagctgagagagaagctactccgactggatcctcccagtaaccaacaa
cacactctcattgttagcaaggatgaagaagcagactcgaggccttctgctcccaaactg
aatgttgaacctgccactgagagtgagaatgagggtgaggaagaacgaggcagagatgag
ctgcagattcacatcaaaggtgccaacaaatctaattctgatctggaggcagatgctgag
gatgaggaagaggaggtgttgttacctgacaccactggtgggagctgcataccagtgaga
gattcccagaataggtccaagtgcggggaacacaaacgcaaaacaagcccttattttaaa
aggaaacaccccagtgatgaccttagtccccccaggaggaaggccttcaagaagtggaca
cctccccgctcaccctacaacctcgtacaggaaacacttttccacgacccctggaagctt
ttggtggccaccatttttctgaataagacgagtggcaagatggccataccagtgctgtgg
cagttctttgaacgttacccgtctgcagaggtgacccgggaggccgactggaagcccctg
tctgaactaatgaagccactaggcctgtatgagctcagagcaaaaacactcgtacgcttc
tcagatgagtatctaactaaacagtggcgttaccccattgagttgtacggcattgggaag
tacggcaacgactcctataggatcttctgtgtggacgagtggagagtggtgaaacctgaa
gatcacatgctgaacaaataccacgactggctatgggagaaccatgaaagacttggaatc
tga
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