Notothenia coriiceps (black rockcod): 104966719
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Entry
104966719 CDS
T04920
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104966719 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104966719 (scarf1)
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
104966719 (scarf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_PEAR1L
EGF_TEN
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104966719
NCBI-ProteinID:
XP_010794255
UniProt:
A0A6I9Q100
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MKLLLGALSALLCCSLSSSQTLDPAGKNVCHNIRDPSTLVCCTGWRQEGTECTLPVCEGE
QACLKDEICVYPGVCRCPPGYFGAHCKTRCPGEFWAADCRKVCECFPHGRCHPVTGECTC
NPNRWGPLCQFPCKCVRHGHCHPVHGNCSCDEGWWTATCSKPCQCGSGGSAGPGCDQLTG
RCQCNRGHWGLKCPVACNCYLSQCNQRTGVCECEAAWWGPSCDRRCNCDLTHSSCDPNTG
QCLCQPGYQGVYCNQPCEAGKYGSGCKRSCGFCRDHRPCSDTDGACDACESGWNGTRCDR
PCPAGSYGDGCLEECPLCRNNEPCDPKTGNCWRCNPGRTGPRCEESCTNRTFGDACGFLC
SPCFHGDCHRVTGRCDCQPGFTGESCNSSCPALQFGFNCSSACDCGEGSGCDPVTGVCPN
SGRAAVIAGVLVPLLLLLLAVLCCCLCCGGAPAGGKDRATVAEGGWSVRMKYHVYSVLAN
IGAALPCISDWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYC
VPPREDFPSVAGGEFHEMSSKCNMFMDPSGFSCEDITSPFNIPRTSSIAKSKRPSVSFAE
GTRFSPKERRGSAQDPGALPGHLRNKPKSPWGVLMLSALQSQGSASKTAQEDGAEDHEGD
DDGDAQETEYEETNYDAGDQEVDRTASRTTLQVPGASGRRRTMSNTAAHKGTQLPTPASD
AQGGVLNKATTVYVTVGKAGKPVSKTETSSEGPVQAMLRRIGSLQRQREQEVGRPKPKGA
EAIVKPPRRKLGARASVWEEGAPPAGEVGICKPIRRKHASVNTPDTAGENDTSSESGTPK
RPLSSILKSVPELALADSGSDLRAEGSDPTSGKTEGPYLTVGAAGDAESLNEVIANEGEV
VSVNDEPCYENVIIKHT
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctcctcggagctctgagtgctctgctctgctgctccctgtcctcctcacaa
acactggatcctgctgggaaaaacgtctgccacaatatcagggacccctccaccctggtc
tgttgcactgggtggcgtcaagagggaacagagtgcaccttacctgtgtgtgagggtgag
caggcctgtctgaaggatgagatctgtgtgtatcccggagtgtgtcgctgcccccctggc
tacttcggagctcactgtaaaacacgctgtcccggtgagttctgggctgcggactgtcgc
aaggtgtgtgagtgcttccctcacggccgctgtcaccccgtcaccggagagtgcacctgc
aaccccaaccgctggggcccgctctgccagttcccctgcaagtgcgtccggcacggccac
tgccaccccgtccacgggaactgctcctgtgacgagggctggtggacggccacctgctcc
aagccgtgccagtgcggcagcggggggtctgcgggccccggctgcgaccagctgacaggc
cggtgtcagtgcaacaggggccactgggggctgaaatgtcccgtcgcttgcaactgctac
ctgtcccaatgtaatcagcgaacaggtgtgtgtgagtgtgaggcagcctggtgggggccc
agctgtgaccggaggtgtaactgtgacctcacgcacagcagctgtgacccgaacactgga
cagtgcctgtgccagccggggtaccagggggtctactgcaaccagccctgtgaagctggg
aaatacggcagtggctgtaaaaggagttgtggcttctgcagagaccaccggccctgctcg
gacactgacggcgcctgtgacgcctgtgagtccggctggaacgggacacgatgcgaccgg
ccgtgcccggctggttcctatggtgacggctgcctggaggagtgtccactctgcaggaac
aacgaaccctgtgacccaaaaactgggaactgttggaggtgtaatccgggacgcactggt
cccaggtgcgaggagtcctgcactaacaggacgtttggagacgcctgtggtttcctgtgt
agcccatgtttccatggtgactgtcatcgtgtgacaggaagatgtgactgtcagcccggc
tttacaggagaaagctgtaacagtagctgccccgccctgcagttcggcttcaattgttcc
tccgcctgtgactgtggggaggggagcggctgcgacccagtcactggagtgtgtcccaac
agtggcagggctgcagtgatagcaggtgtgctggttcctctcctcctgctgctcctcgct
gtgctctgctgctgtttgtgttgtggaggggctcctgctgggggcaaagacagggcgact
gtggctgagggaggctggtcagtccggatgaagtatcacgtctacagcgtcctggccaac
atcggagcggccctgccctgtatctctgattggtcctctggcctgccccgtgtcacagtg
tctcaccatgacccagaactgacgttcaaccacagcttcattgagcctccgtcgtctggc
tgggtgacggaggggtcgtccttcgacagtgatgaggaggagggggaggcgctctactgt
gtccctcccagagaagacttcccttcggtggcgggcggcgagttccacgagatgagctca
aagtgcaacatgttcatggacccctccggcttcagctgtgaggacatcacctcgcccttc
aacatccctcgcacctccagcatcgccaagtcaaagcggccttctgtttcttttgcagag
gggacccgcttcagccccaaagagaggcgtggctcggctcaggaccccggcgctctccct
ggtcacctgcgaaacaaacccaagtcaccctggggtgttctgatgctgtctgctctccaa
agtcaaggaagtgcctctaaaactgcgcaggaagatggagctgaggaccatgagggtgac
gatgatggggatgcgcaggagacagaatatgaggaaactaactacgatgcaggggaccag
gaagtagacaggaccgcttcccggaccaccctgcaggtccctggtgcctcaggacgaagg
aggactatgtccaacacagctgctcataaagggacccagctgccgacacctgcctctgat
gctcaggggggggtcttaaataaggccaccacggtgtatgtgacggtgggtaaggcaggg
aagcccgtgtccaagacggagacgagctctgagggtcccgttcaggccatgctgcggcgc
atcggaagcctccagagacagagggagcaggaggtaggcaggcccaagcccaaaggagca
gaagctatcgtcaaaccccccaggaggaagctgggagcgcgggcgagcgtgtgggaggag
ggggcgccgcccgccggggaggtaggaatatgtaagccaatcaggagaaagcatgcttct
gttaacacccctgacacagctggtgagaacgacacatcctcagagagcggcactccaaaa
aggccgctgtcgtccattttgaagagcgtgccagagctggctttagctgactcagggtca
gatctgagggcggagggcagcgaccccacctcgggaaaaactgagggcccctacctgacc
gtgggagcagcaggagatgcagagagtctcaatgaggtcatcgccaacgaaggagaggtg
gtcagtgtgaatgacgagccctgctatgaaaatgtcataattaaacacacatga
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