Notothenia coriiceps (black rockcod): 104966864
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Entry
104966864 CDS
T04920
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104966864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104966864
03041 Spliceosome [BR:
ncc03041
]
104966864
03036 Chromosome and associated proteins [BR:
ncc03036
]
104966864
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104966864
Spliceosome [BR:
ncc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104966864
Complex B
104966864
Complex C
U2 SnRNP specific factors
104966864
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104966864
TFTC complex
104966864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
104966864
NCBI-ProteinID:
XP_010794482
UniProt:
A0A6I9Q0T6
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
ATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEAD
SDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPGGSDGPSGVLICSE
NYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKV
TLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQIAHLGDDDEEPEF
SSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMTCQVSVLA
NT seq
854 nt
NT seq
+upstream
nt +downstream
nt
gagcgacagagaaacagaagctggtttatattctgaacagagatgcagctgcgaggctca
ccatttcctctccacttgaagcccacaaagccaacacactggtgtaccacgtagtgggag
tcgacgtcggctttgaaaaccccatgtttgcctgcctggagatggactatgaggaggctg
acagtgacccgacaggagaagctgccgccaacacgcaacagacgctcaccttttacgagc
tggacctcgggttgaatcacgtggtgcgaaagtacagtgaggctttggaagagcatggaa
actttctcatcactgttcctggtggttcggatggtcccagtggagttctgatttgttccg
aaaactacatcacctacaagaactttggagaccagcctgacatccgctgtcccatcccgc
gacgcaggaacgacctggatgacccggagcgcggcatgatttttgtctgctcagcaactc
acaagaccaagtccatgttcttcttcctggcccaaactgagcagggagacatcttcaagg
ttacgctggaaacagatgaggaaatggtcacagaaatccggctgaaatactttgacacaa
tccccgtggcaacagccatgtgtgtcctgaagactggcttcttgtttgtgtcttcagaat
ttggcaaccattacctttaccagattgctcacttgggtgacgatgacgaggagcccgagt
tctcctctgcaatgcccctggaggagggagacacctttttcttccagccccgccccctca
agaacctcgtgctggtggacgaacaggagaacttatcccccatcatgacctgtcaggtta
gtgtgttagcgtga
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integrated database retrieval system
