Notothenia coriiceps (black rockcod): 104966909
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Entry
104966909 CDS
T04920
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104966909 (dennd4a)
Membrane trafficking [BR:
ncc04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104966909 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
104966909
NCBI-ProteinID:
XP_010794554
UniProt:
A0A6I9PUB4
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MMEDKGPRVADYFVVAGFTDSSKPLEDELHFDDACPKSVKPNAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNAASLRGPQIFLCFKRGRDKPPLTDLGILYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAAKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMV
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPFSEEDLSERQRSQLGMPSSDLGS
DGSRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPST
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSCPCPFIVGVDSRYFDLYVPP
SDISCVDLDTNTISQKEDKKALTWKILPRRACKHLLNTLNKIYQQLAEGGQLNREDVHME
HTVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSCLLPITQAPSEKTTDASSLFDI
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLYTTGGKMDS
ERPEETRLMELDESHHSEHTVYVNPPELPPLPQGEEHPLCYSYSGFPVLNAELLEPLDGT
SPPSAGMNSRHSSPASPTAIFRRSKQEIKSAQRIAKTYSSMPQMWSKCLLRHCYGLWFIC
LPGFVDTCHSKARALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQHSQPVLAVKVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLQFKRVGKKQQTPH
RDPQLSDGSDLDTVSHGSLDSTNDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSK
EEERMCTRDSDNTPSVEDKGPRQSTPEIEAAGSSISPSTRNCKPTDIRAVNGFMRVSSPS
SNSSLSGGLPKKERPKSLDLSDGQGSLRLTVPQLGSTKQHHLAADRLHGVEEEETETDNQ
KPGEERSVSCSGAAERPGGSMERSVSCSAGTASRTGIQKGFDPLSLMSSDAAECNQENGD
TPTARRDLAEEIEMYMNNGNSPLSSRTPSMDLQNPSSPLFRSASSPHTSPRPSTLLRSNT
HLPLPVRSKERLRTSPSLPLGVCTKVRERPSSLVSPSSPTPSSSSSFSMDSLFTPTLDIF
KSSVLSAGKGVAEKASRFYSRLSSQTSLTQDANSDQISVCSLTSGEADCSSLLDHDSCLD
PDGFTSPQHGSVSRLRRSPVVGHANLGSPSTPDRVFRHNSFSGGLALPFKTPHTPDSSPD
TRCFQPTPNYTIEVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFL
NVEIKDLRPHSRSSKESNPVTEEVTSATLNPETKRSSSDDAAQSSKGPGQEQGSSERAGL
PRVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDHHPIVFWNLVWYFRRLELPSNLPA
LILVSQHCSHGDQTPQNVSYEDSKQVLVRIMWDNLKLHKDKVQPCYVLWNSHCANSLVRS
GLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQIIQLLGPELGFKRQRSLYRDLLFLALVA
LGKNNININAFDREYKLAYDRLTPNQVKLTHNCDRPPGAGVMECRKTFGEPSL
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaggggcctcgtgtagccgactactttgtggttgccggtttcaccgac
tcatccaagcctctggaggacgagctccactttgatgatgcctgtcccaagtctgtgaaa
ccaaacgcccccatcaccgacgtagctgtggtgatccgctccctgggtgaagaggtgccc
ccgggtttcacctgtgttgaaagcaccccctcaggcctctctgcagagctcaatgcagcc
agcctcaggggccctcagatattcctgtgcttcaaacgaggcagagataagcccccactg
acagatcttgggattctgtatgagtggaaagagaaactgaaacctggatgtcacatcgtc
cagaccacgccctcaggtcgccccgccaacatcagcagctcctcgtcacagcgcatctac
atcacctaccgccgtgcagccaagagccagcctcacacctcactggccgtcactgatgtc
tgcatcatcatccccggcaagggggagacgcccccccacaccttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcctcagtctacctttgttacaagaagtctctggct
aaagcgaacacaatcgcatacaaagcaggtctgctgtgtaggtaccctgaagaggactat
gagtccttcccactgcccgagtccgtgcctatgttctgcctgcccatgggggcaatggtt
gagtgttggccagcacacaccaaacactccctgcctgttttttccacatttgtactgacg
ggtgcctctggagaaaaggtgtacggagcggccatccagttctatgagcctttctcagag
gaggatctgtctgagcgtcagcgctcgcagctcggcatgccaagctctgatctggggtct
gatgggagccggagtgtttacagcaacaagagcatctgcctgctctcccactggcctttc
ttccagtccttcaggagctttctcactttcctctacagatactccatctctggcccacat
gccctgcctattgaaaagcacatctctcacttcatgcaaaatgtgccattcccctcgact
cagagaccacgcatcctagtgcagctgtctccacatgacagtctgatgctgagccaacct
gtgtcctctccactgcctctcagtggtgggagtctgtccacattactgctgaatctgggc
ccgaagaatgcagccactctgctggtgctggccgtcaccgagcataagatcctggttcac
tccctgcgcccagctgtgctcacaagtgttacagaggccctcgtgtctatgatcttcccc
ttccactggccgtgcccgtacatccctctgtgcccgctggctctggccggtgtgctaagt
tgtccttgccctttcattgtgggtgtggactctcgatactttgacctttatgtgccccca
tctgacatcagctgcgtggatctggacacaaacacaatctcccaaaaagaagacaagaag
gctttaacgtggaaaatcttgccaaggagagcctgtaaacaccttctgaatacactgaat
aagatctatcagcagctcgctgagggtggtcagctgaaccgggaggatgtgcatatggag
cacacagtgactgacagtgagctcaacggggggaagagcctccacactctggagctggag
atccaggaggccttcctgcgtttcatggcggccatcctgcgaggctaccgctcctgcctg
ctgcccatcacacaagccccctctgaaaagaccaccgatgccagttccctcttcgacata
caaggttttctcaagagcagagaccgctcccaccaaaggttttactccctcatgacaaag
actcaaatgttcagccgtttcatagaggagtgctctttcgtcagtgataaagacgccagc
ctggccttctttgatgaatgtgttgataagctatacaccactggaggcaagatggacagt
gagcgaccagaggaaaccagactgatggagctagatgaatcccaccacagcgagcacacg
gtgtacgtcaaccctccggagctgcccccactaccacagggagaggagcatcctctgtgc
tacagctactctggattccctgtgctgaacgctgagctactggaaccgctggacggaaca
agtcctccttcagccggcatgaactcacgtcacagtagcccagctagccccacggccatc
ttcaggcgctctaagcaggagatcaaatcagctcaaaggatcgccaaaacctattcttca
atgcctcagatgtggtccaagtgtctgctgcgccactgctatggcctctggttcatctgc
ctcccaggctttgttgacacctgtcactcaaaggctcgggctctgcgtacagcttacgat
gtgctgaggaaaatgcaggacaagaagttgcaggctccagatgaggtgtgttaccgtgtg
ctgctgcagctgtgtgggcagcacagccagccagtcctcgctgtcaaggtgttgtttgag
atgaagaaagctggagttcaacccaacgccatcacctatgggtactacaacaaggcggtg
ttggagagcacgtggccctccaccaccagaggaggatactttctgtggggaaagctgagg
aacgtggtcctaggtgtgctccagttcaagcgagtggggaaaaaacaacagacaccgcac
agagatcctcagctttcagacggcagtgatcttgacacagtcagtcatggcagtttggac
agtactaatgactctgctgagcgcacatccattgacacggacttcactaaaatggactcc
agtgatgatggatttagtacaggtggacagtcagaccaaggctacgattcactatccaaa
gaggaagagaggatgtgcaccagagatagtgacaacacaccatcggtggaagacaaagga
ccgaggcagtccacacctgagattgaggctgcaggcagcagcatctctccttctacaaga
aactgcaagccaacagatatcagagcagtcaatggcttcatgcgggtttccagtccatct
agtaacagcagtctttctggaggtctgccaaagaaagagaggccaaaatctcttgatttg
tcagatggacaaggaagtctaaggctaaccgtgcctcaactaggctcaacaaagcagcat
cacctagctgctgacagactgcacggtgtagaagaagaagagacagagactgataatcag
aaacctggtgaggagagaagtgtcagctgcagcggtgcagcagagaggccaggagggtcc
atggagaggagtgtcagctgcagtgctgggacagcgagcagaacaggaatccagaagggc
tttgatcccctgtcactgatgtcttccgatgccgcagaatgcaatcaggagaatggagac
acgcccacggcccgacgcgacctcgccgaggagattgagatgtacatgaataatggcaac
agtcccctgagcagccgcacccccagcatggacctgcagaacccctcgagccctttgttt
cgctccgcctcgtcgcctcacacctcgcctagaccctccaccttgctgcgctccaacacg
cacctcccgctgcctgtcaggtccaaagagaggctgaggacgtcaccctctcttcccctg
ggtgtttgcaccaaagtcagggagaggccttcctccttggtgtccccgtcctcacctact
ccctcctcctcctcctcgttctccatggactctctgttcaccccaactcttgacatcttc
aagagcagcgtgttatcagcagggaagggcgtggctgagaaggccagtcgcttctactcc
cgtctgtcctcacagacttcattgacacaggatgcaaacagcgaccagataagtgtctgc
tcactgacgtcaggagaggcggactgctcctcactgcttgatcatgactcctgtctggac
ccagacggcttcacctccccacagcacggcagcgtgtcccgcctcaggaggagcccggtt
gtaggtcatgccaacctgggcagccccagcacccctgacagagtgttcagacacaactcc
ttctcaggtggtttggcacttccttttaaaactcctcatactccagattcctcccccgac
accagatgcttccagcccactcccaactacaccatagaggtgctgatgtccagctgttca
ctctgtaagacgtgtgactgtctggtctacgacgaggagataatggccggatggacagca
aatgactccaacctgaacagcacctgtcctttctgtggcacagctttcctgcctttcctc
aatgtagaaatcaaagacctgagaccacacagcaggtcttctaaggagagtaaccctgtt
acagaggaagtcacttcagcgactctcaatcccgagaccaaaaggtcttcttcagacgat
gcagctcagtcctctaaaggtcccgggcaagaacaggggagcagcgagagggcagggttg
ccccgggtgacggtgccctacctgagtcctctggtcctgtggaaagaattggagagcctg
ctggtgaatgagggcgaccaggccatctcctcccccagtgttgtggaccatcaccccatc
gtcttctggaacctggtgtggtacttcaggaggctggagctgcccagtaacctgcccgct
ctcatcctcgtctcccagcactgtagccacggagaccagactcctcagaacgtttcatac
gaggacagtaagcaggtgcttgtgaggataatgtgggacaacctgaagttgcacaaagac
aaagtccaaccctgctatgtcctgtggaactcacattgtgcaaactccctggttcgctct
gggctgtgtgaagaagggcagctctttactgtggagctcctgcagggttttgtgaggagc
atcaagaaaagtgatgtctatcagccaatgagccagatcattcagctgctggggccagag
ctgggcttcaagagacagaggagcctgtaccgagacttactgttcctcgctctggtggct
ttgggaaagaacaacattaatatcaatgcttttgaccgggagtacaagttggcatatgat
cgcctcacccccaaccaggtaaaactgacacacaactgtgaccggcccccgggagcagga
gtcatggagtgcaggaagacttttggggagcccagtctgtaa
DBGET
integrated database retrieval system
