Notothenia coriiceps (black rockcod): 104966940
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Entry
104966940 CDS
T04920
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104966940 (robo1)
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
ROBO family
104966940 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
104966940
NCBI-ProteinID:
XP_010794592
UniProt:
A0A6I9Q120
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MVTVCLLVVLFSMLVMLGVPIDHKGPHGAHRSAGLSKSQSCKRLPNNFGLHQTLRHSHNK
PHKCNQVFHRSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERV
ETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAASHNASLEVAIL
RDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKLMIT
NARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVMLVDQSVEFRCEARGD
PVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVGKAEASASLTVH
VVSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRF
SVTQSGDLTITEAERSDMGYYSCQAINTAGSVLTKALLEITDVVSDRPPPVIRQGPTNQS
VAVDGTVILNCVATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTC
IASTPSGEATWKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEITDSTRTSISLSWRPNL
NAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDP
SPITEAVKTQDIPPTSQGVDHRQIQRELGEVLIHLHNPTILSSSSVRVQWTVEQQSQYIQ
GYKVMYRPSPQGLQRSEWAVFEVRTPGEESAVVPQLRKGVTYEFKIRPFFNEFQGTDSDI
KIGKTLEEAPSAPPREVTVTESEDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESKYH
INRTVDGSVLSLLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRMTETGIQEN
PLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFT
PTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMNCCTAGNGNSDS
NLATYSRPADCIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFV
GPGGQPTPYATTQLIQSSIMGNHGNPDRGTGGLLGGGEMNEKHCWKPPSHQQQKQEMGSQ
MQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGQKKG
VRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMDESCEPDMQCPMPPSHMYLQPD
ELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDNHERRRH
TVSPPPLHMPHSPSHTYGYIPSPLVLDTDGMDEDDDILEEEEEEGDETDSEVAKMHYHHT
HPHTHPHHPQMHPRRLLLRGLEQTPASSTGDLESSVTGSMINGWGSASEEDNVSSGRSSA
VSSSDGSFFTDADFAQAVAAAAEYSGVRVAKYPHTLGPEVGGASARKYQINPSGHRPSSP
VSTDSNMSMAAVHRRPPKKQKQHPAAHPAAHPAAHPAAHPAAHPGNQRREVYNEDLPPPP
IPPPAVLKSPTHPSKAVLEGRGVSPKAVEGRDKRGGTGGYQLREGSDTRTSSSERREAQE
RQRTAHGGKGTKHEGSTASKARQHAEDIQPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRR
RGEGGRRNPADMSLNTTGAFQPGDEESEMVES
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgtctgtttgctggtggtgctgttttccatgctggtcatgctgggagtccct
atagaccacaagggaccacacggagcccatcgcagcgctggcttatcgaagtctcaatcc
tgcaaaaggctgcctaataattttggacttcaccagactttgagacactcccataacaaa
ccacacaaatgtaaccaggtctttcacagatctcgtctacgccaagaggacaccccaccc
cggattgtggaacacccctctgacctgattgtctccaaaggggagcccgccaccctcaac
tgtaaagctgaggggcggcctaccccgacagtggagtggtacaaggatggagagcgggtg
gaaacggacagggacaatccccgttctcagcgcatgctgctgcccagtggctccctcttt
tttctacgcatcgtccacggacgacggagcaagccggatgaaggttcctacgtctgtgtt
gcccgcaactacctgggagaagcagcgagccacaatgcctctctggaagtagccatttta
cgtgatgacttcagacaaaaccctgcagatgtgatcgtggcggcaggagagccggcggtc
ctggagtgtcaacctccccgtggacatcctgaacccaccatatcgtggaaaaaagatgga
gtaaacattgacgaccgagatgagagaatcactatacgcggagggaagctgatgatcaca
aatgcccggaagagcgatgctgggaaatatgtgtgcgttggcacaaacatggtcggagaa
cgtgaaagtgaaatagccgaactcacagtacttgaacgtcccagctttgtccgtcgccca
ggcagccaggtgatgttagtagaccaaagtgtggagttcaggtgtgaggctcgtggcgac
ccagttcccaccgtgcgctggaggaaagacgatggtgacctgcccaaaggaagatatgag
attcgtgaagaccacaccctgaagatccgtcgtctgacttcagccgatgtaggctcctac
acctgcgtggtcgagaacatggtgggcaaggcggaggcatcggcctcgctcaccgtccac
gttgtgtctgtgccaccggcttttgtggttagaccaaggaaccaggtggtgggggttggc
agaaccgtcacctttcagtgcgaagccactggaaacccacagccagccattttctggcag
cgggaaggcagtcagaaccttctgttctcctaccaacctcctcaaccatctagccgattt
tctgtaactcagtctggggacctgaccatcacggaagccgaacgctcagacatggggtac
tacagctgccaggccatcaacactgctggcagcgtcctcaccaaggctctgctagagatc
actgatgttgtgtcagaccgcccgccaccagttatccggcagggcccgaccaatcagtca
gtagctgtggacggcacagtcatcctcaattgtgtggcaacaggaaaccccacccccacc
attctgtggaggaaggatggtgtgttggtgtccacacatgactccagggtcaaacagctg
gacacaggcgcattacagatccgctatgcaaagcttggtgacactggtacctacacctgc
atcgcatctacaccgagtggagaggccacatggaaagcctacttagaggttcatgagttt
ggagttccagttcagccaaacaggcccactgacccaaacctgatccccagtgccccttcc
aaacctgagatcactgattctacccgcacctccatctccctttcctggagacctaacctt
aatgctggagccacacccacctcctatataatagaggccttcagtcatgcatcagggagc
agctggcaaaccttggcagagcatgtgaaaactgagtcatttgtactgaagggcttgaag
cccagtgcagtctacctcttcttagtacgggcagccaatgcctacgggctgagtgatccc
agtcctatcactgaagctgtgaaaacacaagatatccctcccaccagtcagggcgtggac
catcgtcagatccaaagggagttgggagaagtgctcatacaccttcacaacccaaccatt
ctctcctcctcatctgtcagggtgcagtggacagtggagcagcagtcgcagtacatccag
ggctacaaggtgatgtacagaccttcaccgcaggggctacagaggagtgagtgggctgtg
ttcgaggtgcgaactcccggggaggaaagcgctgttgtgccgcagcttcggaaaggagtc
acatacgaattcaaaatccgccccttcttcaatgagttccagggaacagacagtgatatc
aaaattggcaagacgctggaagaagcccccagtgccccgcctcgtgaggttacagtgacg
gagagtgaggacaatgggaccgccatcgtggtctcctggcaaccccctccagaagaggaa
cagaatggggtggtccaggagtacaagatttggtgcttggggaatgagagcaagtaccat
atcaaccgcacagttgacggctcagtcttatccctgctcattccaagtctggccccaggg
atccgctacagcgtggaggtagcagccagcaccggggcgggtcccggggtcaagagcgat
atcaccttcttccagcttgatgcatctgggcgaatgacagagacggggatccaagagaac
cccctgtcccagcagatctccgatgttgtcaagcagccggcctttatagccggcatagga
gctgcgtgctggatcatcctcatggtcttcagcatctggttgtatagacaccgaaagaag
aggaatggcctctccagcagttatgcaggcattcgcaaagttccgtcatttactttcaca
ccaaccgtggcatatcagagaggaggagagggtgttagcagcgctggaaggcctggtttg
ctaaacattggggaatctgctacacaaccatggctggcagacacatggccaaactcctgc
tccaatcacaacgactgcagcatgaactgctgcactgcaggcaatggcaacagcgacagc
aacttggcaacctacagccgcccagccgactgcatcgccaattataacaaccagatggaa
aacaagcagaccaacctcatggtgccagagtcaggcgtctatggagatgtagacttgtcc
aacaagatcaatgagatgaagaccttcaacagcccaaacctgaaagatggccgctttgta
gggcctgggggccagccgacaccatacgccaccacccagctcatccagtcctccatcatg
ggcaaccacggtaaccccgacagaggaaccggaggcctcctgggtggaggggagatgaat
gaaaagcactgctggaagcccccctcacaccagcagcagaaacaggaaatgggctcccag
atgcagtacaacatcatggagcaaaacaagctgaacaaggaccgctacagaggaggtgac
agccctatgcctgccaccatcccctacaaccagacccatgacagtcacactggaggctcc
tacaacagctcggaccgaggcagcagtagcacctccgggagtcagggtcaaaagaaggga
gtgcgcacccccaaactacccaaacagagcacaatgaattgggctgaccttctaccccct
ccccctgcaaacccacccccaagtcggagcacagaggagtactcgctttccatggatgaa
agttgtgaaccagacatgcagtgccccatgcccccctctcacatgtacctgcagcctgat
gagctggaggaggaagaggagatggagaggggccccactcctcccatccgaggagcagcc
tcttcccctgcagctgtatcttacagtcaccagtccacagccaccctcaccccctccccc
caggaagagatgcagccgatgctccaggatgcacctgacaaccatgaacgcaggcgccac
acagtgagccccccaccccttcacatgccccactctccttcacacacatatgggtacatc
cccagcccgttggttttggacactgatggcatggatgaagatgacgatatattggaggaa
gaggaggaggagggtgacgagacagattcagaggtggccaagatgcactaccaccacacc
cacccccacacacacccccaccacccccagatgcatccacgaaggttgctgctccgaggg
cttgaacaaacgcctgcgtccagcaccggcgacctggagagctccgtcaccggctccatg
atcaacggatgggggtcggcttctgaagaggataatgtctcttcagggaggtccagtgcc
gtcagctcatcagacggatccttcttcactgatgctgactttgctcaagcggtggctgca
gctgcagagtactcaggcgtcagggtggccaaatatccacacacactgggcccagaagtc
ggaggagcgtcagcacgaaaataccaaataaacccgtcaggccaccgtcccagcagcccg
gtgtccactgacagtaacatgagcatggcagctgtacacaggaggcctcctaagaagcag
aaacagcatccagcggctcatccagcggctcatccagcagctcatccagcggctcatcca
gcggctcatccaggaaaccagcgacgtgaagtctataatgaagatctccctcctccgccc
atcccacctcctgcagtgctcaagtcacctacacacccgtccaaggcagtcttggagggc
cggggagtttcccccaaagcagttgaaggtcgagacaagagaggaggaaccgggggctac
cagcttagagagggttcggacaccagaaccagctcctctgagcgcagagaggctcaggag
agacaaaggactgctcatggagggaaagggactaaacatgagggtagcaccgccagcaag
gctcgccaacatgcagaggacattcagccctatagccgaccacagttccccacagtcaac
agcccccgggaccccagctcctccagctccatgtcttccaggggctcgggggggcggcgg
agaggagaagggggccgcaggaaccctgcagacatgagcctcaacaccacgggggccttc
caaccaggagatgaagagtctgagatggtagaaagctga
DBGET
integrated database retrieval system
