Notothenia coriiceps (black rockcod): 104966952
Help
Entry
104966952 CDS
T04920
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104966952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104966952
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
104966952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104966952
NCBI-ProteinID:
XP_010794605
UniProt:
A0A6I9Q1Q2
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MMGGSETVSGDKDGVHTTAIHVPIGWQRRVDGGQVIYVSPSDTALCSLDEVKTYLLMDGT
CKCGLECPIIIHKVFNFTVGVKVEQQSQPLGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPFANLHHPEMSSGLDSRDSKRVLLEREEDDHGIYHHPKLRPHSNLHMTPCASPKSSHH
FIYPYNGSSPVLHTGSNSHHPLDALRRLHPSSSSSSSSTSSFPAYSAAQRSPRTPTPQGQ
RTPKTPETPGSPRLGPLSSPPPSSPMGGGGRGAQTHAYHPHGVIVGGSPLSPSPSLSPSI
YNMNCVSPHQRSRHPSASPSPISDQGGGFTAAAAGGLMGSNLHQRRKSSSSSPHSPLPGG
SPNPSPHFPKYKLEDILEQFKNSGNSSTNNHHLLIPTNSSLLTNQSSSNPLSSKPSKTTL
SPIQSAGPPGFGLNSAGTSSLPLGPYLNHHHHSHQGKVPHPASFPASSLLSAAAKAQLAH
QITQGSKAEVLKEAQQQQSSKVTNSTLHNSHSPSSHASTRPLYPSLAAASSVLFPPSHSL
AQSLASSLPHLPPVAERNASHRKRQRRSPTVLSMLRDTQQLVNGPRRTSPGDAISATVIN
LSSSASSTFSSHSSSTSAVQNQNAAMLENHHHLISGRTQRLPGPRQMAHLSRAPRQTEAL
DFTTGSTTTPLGLDPPTQPLSALLHLLSVQNAQASASAQATEGGRHTHKQSPRRSPSSPA
PHSKVRHPQTRSPCRTGNTNPPLSVLQPLSPPPSQYRSVQSPSRPQSTKSSPLHRHSPCS
TALSNSHLALHNSSSPSRHMLPIPYYHPTEHHIPTIDSLSQTPLRETEMGSNSLSTSEDL
SHSQDSVSMAIPSSPKPLDLSNHVLALLAASSTAPPGEGSSPDHTTDVVMSSQGNPTAGT
EESRCVDPKVTKPPAATSPGPPISSRLGDNPSPHTPSGVGDSTSHLPLAEAFPFMNQEQL
LQLLSSTGGLPSLLDPAVLASLPLGGLWLGGQNAQIHPANATSQPPQTLAEQHHSEQQQL
LMQHQETQDHHQKQQHMNTNPLFPLLPLLSGAHGELPLNLLGLLNPLLPPGSTHTPGQDS
DLGLSEKPSLQALLMASLLLGQQHGPLLPLSGLGQLSQVSLEVPQHIPSSLEGLTLDKTS
GLLDPSALSAAGLLEGLLPLPPGAEGSLQALQSLLLSAALPPPHAAFLPLSPALLNAALS
SAELHPHSHTQLAPAQQTHHTQPQVPTDAGVDTLIPLSLQGKDNPLLQQLLPTLLNSALL
GDLSAITGLHNMLGIGAGSLLLPQTSALGMPLLHGPDGAINLLNNIQLNLAPPSEGEKPM
PLQETQNPSPQEDIPANQMAPSPARVSAPAQGHTPPPHRGSEGRSVIDPYTSFMDTIYTS
FLQVSAKEQEGRGHMGPSDPTSPFCALPPVSFPVEHHTPSTSVPTLPQASAPVSLSPRRA
CSLRNPDLSRLSLEAAAHSPAQGTPKPTEEGSTSHLQRRRAMVGGHTHPEPPLPSIYLEE
AKTDYTGQTAAVCPYVEAGVDRQGHLPHPGYLSPRDGCSGRPNEETAGTLMHTEQGRDQA
GAAGGARRGRKRKQTLQNVLEDFRDMDATALEETKATTVLLKPERSVRGRRRRGARSQRQ
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagactgtcagtggggacaaggatggggtccacaccactgcaata
cacgtccccatcggctggcagaggagagtggatggcgggcaggtgatctatgtcagtcct
agtgacactgccctatgctctctggacgaggtcaagacctatctcttgatggatggcacc
tgcaagtgtggtcttgagtgtccaatcatcatccacaaggttttcaacttcactgtggga
gtgaaggtggagcagcaaagccagccattaggcaaagctgagcaggacatgaccaaactg
tgtaaccatcgcaggaaagtggtcgccatggcagctctctgtcggagtatgcaggcctca
cagctgccctttgccaaccttcatcatccagagatgagcagtggattggacagccgggat
tcgaagcgagtactgttggagcgtgaagaggacgaccatggcatttaccatcatcccaaa
ctccgaccccacagcaacctccacatgaccccctgtgccagccccaaatcctcccaccac
ttcatctacccctacaatggctcctcccctgtccttcacacaggctcaaactctcaccat
ccactagacgctttgagaagactccatccttcttcctcctccagctcctcctccacctcc
tcattcccagcatacagcgctgcccagaggtcaccccgcacccccacacctcaaggtcaa
agaacgcccaaaacccccgagacgccgggctcacctcgtctagggcccctctcttcacct
ccaccctcttcccctatgggtggaggaggaagaggagcacagactcacgcttatcaccct
catggtgtcattgtgggaggttcccccctctctccgtctccctccctctccccctctatc
tataacatgaactgtgtgtctcctcaccagcgctcccgccacccttcagcctctccttcc
cccatctctgatcagggcggaggcttcacagcggcggcagcaggaggactgatgggaagc
aacttgcatcagaggaggaaatcctcctcttcctctccacactcccctctcccaggtggc
tccccaaaccccagcccccacttccccaagtacaagctggaggacatcttggagcagttt
aagaactcaggcaacagcagcactaataaccaccacctcctgatccctactaactcctca
ttactgaccaaccaaagcagtagcaaccctctctcctctaagccctcgaagaccaccttg
agtcccattcagagcgcaggaccaccaggttttgggttgaactccgcagggacttctagt
ttacctctggggccatatctgaaccaccaccatcacagccatcagggaaaggtgccccac
ccggcctctttccctgcgagcagcctgctctccgctgctgctaaggctcagctggctcac
cagataacccagggctcaaaggcggaggtcttgaaggaggcacagcagcaacagtcatca
aaggtaacaaacagcactttacataacagccactccccctcctcccatgcttctactagg
cctctctatccctcccttgcagcggcgtcctccgtccttttccctccctcccactctctg
gcccagtccctggcgtcttccttgccccacctgccccccgtggcagagcgcaatgcgtcg
cacaggaagaggcagcggcgatctcccacagtgctcagcatgctcagagacacccagcag
ctggttaatgggccgcggaggacctcaccgggagacgccatttcggctacagtcatcaac
ctatcatcctctgcttcctctaccttctcctcgcactcctcctctacctcagccgtgcag
aaccagaatgctgccatgttagaaaaccatcaccatctcatctccgggaggacacaaagg
ctccctggtcccagacagatggcccacctgtccagagctccgcgacaaacggaggctctg
gatttcactacaggctcgacaactacccctcttggtttggaccctccaacccagcctctg
tctgcgctgttgcacctgctcagtgtgcagaacgcacaggcctctgcttctgctcaggct
actgaaggaggcagacacactcataaacaaagccccaggcgctccccatcttctcccgcc
cctcattctaaggtgaggcacccacagactcggtcgccgtgccgaaccggtaacactaat
cctcccctatcggtgctacagcctctttctccccccccctcacagtacagatcagtgcag
tctccatcgcgtcctcagtccactaaatccagtcctctacacagacattctccatgttct
acagcgctgtccaactcacatttagctttacacaacagcagcagcccgtctcggcatatg
ttgccgattccctactatcatccaactgagcatcacattcctacaatagactctctttcc
cagactccattgcgggaaacggagatgggtagtaacagcttatctacatcagaggacctg
agtcattctcaagacagtgtttctatggcgatacccagctccccgaagcctcttgatctt
agcaaccatgtcctggcccttctcgcagcatcttccactgcacccccgggggaggggagc
tcccccgaccataccactgatgttgtgatgtcttcccaaggaaaccccactgcaggaaca
gaggagtctagatgtgtggacccgaaagtgaccaaacctccagcagccacgagccctgga
ccccctatctcctcccgtctcggggataatcccagtcctcatacaccttcaggggtgggc
gactccacctctcacttacctctggcagaggccttcccattcatgaaccaagagcagctg
cttcagctgctgtcatccacaggaggtcttccatccctcctggaccctgcagtcctggct
tcattgcccctcggggggctgtggttgggagggcaaaatgcacagatacaccctgccaat
gcaacatcacaaccaccacagactcttgcagagcagcatcattcagagcagcagcagtta
ctgatgcagcaccaagagacgcaggatcatcatcagaagcaacagcacatgaacaccaac
cccctgttccccctgctgcccttgttgagcggggcccacggggagctgcctctgaacctt
ttgggcctgcttaacccactcctacccccaggctcaactcataccccaggacaggattct
gatttaggactatcagagaaaccaagccttcaggctctgctgatggcctccttgttgctc
gggcaacagcatgggcctttgttacctctgtctgggctgggtcagttgagccaggtgagc
ctggaggttcctcagcacatccccagctctctggagggcctcaccttggataagacctcc
gggctcctggatccatcggccctctcagccgcggggctcctggagggtctcctccccctt
cccccaggagctgaaggctctttgcaggccctgcagtctctgctcctttctgccgctctt
cctcctccccacgcagccttcctgcccctcagccctgcccttctcaatgctgccctgagc
tcagctgagctccacccgcactcccacacccaattagctcctgcacagcaaacccatcat
acccaacctcaggtacccactgatgctggtgttgacaccctcatccctctatcccttcaa
ggcaaggacaaccccctcctccaacagttactgcccactctgcttaactctgccctatta
ggagatctttccgccatcacaggcctccacaacatgttggggatcggagcaggttccctc
ctcctgccgcagacctctgcgttgggcatgcctctgctgcatggtcctgatggagccatc
aacctgctcaataacatacagctaaaccttgcaccaccatcagaaggagagaagccaatg
cccttacaggaaacgcaaaacccttccccacaggaagacattccagccaatcagatggct
cccagtcctgctcgggtttcagcccctgcacagggacacaccccacccccacatcggggc
tctgagggcaggtctgtcatcgatccctacacctctttcatggacacgatttatacctcc
ttccttcaagtcagcgctaaagagcaggaaggcaggggccacatggggccgtctgacccc
acttcacccttctgtgccttaccacccgtttctttccccgtggaacatcacaccccgtcc
acctctgtccccactctgccccaggccagtgccccggtctccctcagcccccgtcgggcc
tgttccctgcgcaacccagacttatccagactcagcttggaagcagcagcccattcccca
gcccaggggacgcccaaacccactgaggaaggctctacgtcacacttacaaaggagacgg
gctatggtagggggacatactcacccagagcctcctctgccatctatatacctagaggag
gctaagacagactatacagggcaaactgcagctgtgtgcccctatgtggaggcaggggta
gataggcaggggcatcttccccacccggggtacctcagtcccagggatgggtgcagtggg
aggcccaacgaggagacagctgggaccttgatgcacaccgagcaaggaagggatcaagct
ggagcagcgggtggagccagaagaggaaggaaaaggaaacaaacgctacagaatgtgtta
gaggacttcagagacatggatgctacagcactagaggaaaccaaggctacgacggtgctg
ctgaagcccgagaggtcggtccgcggcaggaggcgacgaggcgccaggtctcagaggcag
tga
DBGET
integrated database retrieval system
