Notothenia coriiceps (black rockcod): 104967008
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Entry
104967008 CDS
T04920
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104967008
03041 Spliceosome [BR:
ncc03041
]
104967008
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104967008
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104967008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
Nup35_RRM_2
RRM_Nup35
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
104967008
NCBI-ProteinID:
XP_010794677
UniProt:
A0A6I9Q189
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MDDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKA
TYETDNSKHLSFEEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSAFGPIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHMVKCYWGKETPDMMSPMQQMPIPQQNKMSFPAA
AQPYGQWGQWYGNGPQISQYVPNGWQVPAYGVYGQAWNQQGFKPGDGCDED
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatcaacccagaaccttgtatgttgggaatctgtccagggatgtcaccgag
cccctcatcctgcaggtcttcacacagataggaccttgcaagagctgtaaaatgatagta
gatacggctggaaatgatccgtactgctttgtggagttctatgaccacaggcatgctgct
gcctcattggcagcaatgaatggaaggaaaataatgggtaaggaggtcaaagtcaactgg
gccacgacgccaaccagccagaaaaaagacacaagtaatcactttcatgtcttcgttgga
gacctcagcccagaaattactacagatgacgtcaaagctgccttcggtccatttggcagg
atatcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctacggcttt
gtgtctttcttcaacaaatgggatgcagagaacgccattcagcagatgggtggtcagtgg
ttaggaggcagacagatccggactaattgggccacaagaaagccccccgcccctaaggcc
acctatgaaacagataactccaagcacctatccttcgaagaagtagtgaatcagtccagc
cccagtaactgcactgtgtactgtggcggagtcagcacaggactgacagaacaactgatg
agacaaactttttccgccttcggcccaatcatggaaatcagagttttcccagacaaaggt
tattcatttgtgaggtttaactcccatgagtcagcagcccatgccattgtgtcagtgaac
ggcacctcaatagagggccacatggtcaaatgctactgggggaaagagaccccggacatg
atgagccccatgcagcagatgcccatcccccagcagaacaagatgagcttccctgcggcc
gcccagccctacggccagtggggccagtggtacggcaacgggccccagatcagccagtac
gtgcccaacgggtggcaggtccccgcctacggcgtctacggccaggcctggaaccagcag
ggcttcaagcctggggacgggtgtgacgaagattaa
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integrated database retrieval system
