Notothenia coriiceps (black rockcod): 104967018
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Entry
104967018 CDS
T04920
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncc03037
]
104967018 (ift52)
Cilium and associated proteins [BR:
ncc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
104967018 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
MuF_C
Motif
Other DBs
NCBI-GeneID:
104967018
NCBI-ProteinID:
XP_010794691
UniProt:
A0A6I9Q4X0
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MEKEQHNTVVFNVSKRELFTTNNGYKTMQKRLRAQWKIQSLKEELSLEKLKGVKLWITAG
PREKFTASELEVLKHYLDAGGNVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGSIEDEKVGNNAQALTFVYPYGATLSVIKPA
VALLSTGSVCFPLNRPVLAFHQGKEAGKLVVLGSCHMFSDQYIDKEENSKIMDVLLQLLM
ADNIQLNQIDAEDPEITDYTMLPDTGCLSDQLRVCLQEGDENPRDFTSLFDMSLFNLSTD
TLPQVISAYKQLNVKDEPLQLITPQFETPLPQLQPAVFPPALSDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEHDADTDTPFTPL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacaacacaacactgtcgtcttcaatgtctcgaagagagagctgtttact
acgaataatggatacaaaaccatgcagaaaagactcagagctcaatggaaaatccaaagt
ttgaaggaagaactgtctctggagaagctgaagggtgtcaagctgtggataactgcaggt
cccagggagaagttcacagcatcagagctggaggtgctgaaacactacctggacgcagga
ggaaacgtcctggtcatgctcggggaaggcggagaaatgaaatatgatactaacatcaac
tttcttctggaggagtttgggataatggtcaacaatgatgctgttgtgaggaatgtgtat
tacaaatacttccaccctaaggaggcgcttgtgtccaatggtgtactgaacagagagatc
agtcgagctgctggaaaagtggtcacaggcagcatcgaagatgaaaaagttggaaacaat
gcacaggctctcacatttgtgtatccgtacggagccacactgagcgtgataaagcccgct
gtggctctgctctcaacgggctccgtctgcttccccctcaacagacccgtcctggccttc
catcaaggaaaggaggctggcaaactggtagtgttgggttcctgccacatgttcagtgac
cagtacatagacaaagaggagaacagtaaaatcatggatgtcttgctccagttgctcatg
gccgataatattcagctgaatcagatcgatgcagaagacccagagatcacagattacacc
atgttgccggacacggggtgtttgtcagatcagctcagagtgtgtttacaggagggcgat
gaaaacccccgggacttcacctcgctctttgatatgtctttgttcaatttgtcaactgac
accttaccccaagtcatcagtgcttacaagcagcttaatgtcaaagacgagcctcttcag
ctgatcacgccgcagtttgagacgccgctgcctcagctccaacccgctgtctttccacct
gccttaagcgacttgccccccccgatgcttgacctgttcgacttggatgaaacgttctct
tcggagaaagtgcgcctagcacagctcaccaataaatgtacggatgatgacctggaattc
tacgtgcggaaatgcggggaaattctgggtgtgactccaaagctggataaagagcagagg
gatgccaagcacatcctggaacacattttcttccaggtggtagagttcaagaaactcaat
caggagcatgacgccgacacagacacgcctttcactccgttgtga
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