KEGG   Notothenia coriiceps (black rockcod): 104967202
Entry
104967202         CDS       T04920                                 
Symbol
pafah1b1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit alpha
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc00565  Ether lipid metabolism
ncc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    104967202 (pafah1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncc03036]
    104967202 (pafah1b1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104967202 (pafah1b1)
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104967202 (pafah1b1)
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104967202 (pafah1b1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_EML Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_SCAP WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SPT8 eIF2A Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 104967202
NCBI-ProteinID: XP_010794921
UniProt: A0A6I9Q516
LinkDB
Position
Unknown
AA seq 405 aa
MADRPLGLEQQGLVFEEERPPPPNQAPLAPMLEFVSAQTGVPVVAVGGGASLGREQQNEE
LDKKYAGLLEKKWTSVIRLQKKPQRVDPTPAREIPPLSGPPQVPSPVSSSTQSFSCHGVL
LLRTQQIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECI
RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPHQD
GTLIASCSNDQTVRVWAVASKDCKAELREHEHVVECISWAPESAHPTIQEATGSETKKSG
KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGILFHPGGKFIVTCADDKTLRIW
DYKNKRCMKTLGAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggcggataggccgcttggactggagcagcagggtttggtgtttgaggaggagagaccg
ccaccgccgaaccaggcccctctggcccctatgctggagtttgtctccgcccagacgggg
gttcctgtggtagccgtagggggaggggccagtctgggacgagagcaacagaacgaggaa
ttggataagaagtacgccggccttttggaaaagaaatggacctcagtcatcagattacaa
aagaagccccaaagagtggatcccacgcccgccagagagataccgccgttgagtggccca
ccgcaggtcccgtcacccgtgtcatcttccacccagtctttcagttgtcatggtgtcttg
cttctgaggacgcaacaaataaaggtttgggactacgagacaggggacttcgaacgcaca
ctgaagggccacacggattcagtgcaggacatctcttttgaccagaccggcaaactgcta
gcctcctgctctgcagacatgactatcaagctgtgggacttccaaggcttcgagtgcatc
aggaccatgcatggacatgaccacaatgtttcgtctgtagccatcatgcccaatggagat
cacattgtttctgcctcgagggacaaaaccataaaaatgtgggaggtggcaactggctac
tgtgtgaagaccttcacgggccacagggagtgggtccgcatggtgcggccccaccaggac
ggcaccctgatcgccagctgctccaacgaccagacggtgcgtgtgtgggccgtggcctcc
aaagactgcaaggccgagctgcgggaacacgaacatgtggtggagtgcatctcctgggcc
cccgagagcgcccaccccaccatccaggaggccacaggctccgagaccaagaagagtgga
aagccaggccccttcctgctgtctggctccagagacaaaacaatcaagatgtgggacgtt
agcatcggcatgtgccttatgacactggttggccatgataactgggtgcgtggtatcctc
ttccaccccggaggcaagttcattgtgacctgtgcagacgataagaccttaaggatctgg
gactacaagaacaagcgctgcatgaaaaccctgggtgcccacgaacactttgttacctct
ctggatttccacaaggctgctccctacgtggtcactggcagcgtagatcagacagtaaaa
gtgtgggagtgtcgctga

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