Notothenia coriiceps (black rockcod): 104967288
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Entry
104967288 CDS
T04920
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104967288 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104967288 (slc24a1)
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
104967288 (slc24a1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
BUD22
Fimbrillin_C
DUF3093
Motif
Other DBs
NCBI-GeneID:
104967288
NCBI-ProteinID:
XP_010795004
UniProt:
A0A6I9PVL8
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All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MVHCIFVAPEPPQETPSPTPALPGEAPYLKGDYPEDLFSVEDRRRGWVILHVFGMLYMFI
SLAIVCDEFFVPALGVITETLAISDDVAGATFMAAGGSAPELFTSLIGVFIAHSNVGIGT
IVGSAVFNILFVIGMCALFSREILHLTWWPLFRDGSFYIFGLILLIIFFLDNVIMWWESL
MLLACYTVYVIFMKFNVQIEQTFKSLLIKNKNIVRIAIGEPEKVNGDAEHNALPAKGDKK
LLKLKPSLQRGGSSASLHNSTMRNTVFQLMIHTLDPIGEGKFKDKAETLNSVARGATENK
TQDKREDGGDKPEATKEREAAPAPDEQDQPEDKKEDVPTGEDGSGGSDSEEDDSQEDSKE
SSEEEEEEDEEEEEEEEEEGDEEEEEKEDEPLSLEWPETRRKQATYLFLLPIIFPLWLTV
PDVRNQKSRHFFAATFLGSIIWIAVFSYFMVWWAHQVGETIGISEEIMGLTILAAGTSIP
DLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLLYSSLHGFAPMAVSSNGLFCAI
VLLFIMLLFVIISIASCHWKLNKRLGFTMFLLYFVFLVLSVMLEDRIIVCPVSI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgcattgcatctttgtggcacctgagcctccacaggagacaccctcaccaactcca
gctcttcctggtgaagctccatacttgaagggagactaccctgaagatctattttctgtt
gaagaccgtagacgaggctgggtgatcctccacgtctttgggatgttgtacatgttcatt
tcacttgcaatagtgtgtgatgagttctttgttcctgcgctgggggtgatcacagagact
ttagccatctctgacgatgtagcaggagccaccttcatggctgctggaggttctgccccc
gaactgttcacctccttgataggagtcttcatcgcccacagcaatgtgggtatcggcaca
attgttggttcagctgtgttcaacattttgtttgtgatcgggatgtgtgctttgttttca
cgggagatacttcatctcacctggtggccacttttcagagatggatccttctacatattt
ggccttatcttactcatcatcttcttcctggataatgtcataatgtggtgggagagcttg
atgctgctggcctgttacactgtctatgtgattttcatgaagtttaatgtgcaaattgaa
caaaccttcaagtccctactcatcaaaaacaagaacattgtgaggattgctatcggggaa
cctgaaaaggtaaacggcgacgctgaacataatgcccttcctgctaaaggggacaagaaa
ctgttaaagttgaagccatcccttcagcgaggggggagctcagcttctttacacaacagc
accatgagaaacaccgtctttcaactcatgatccacacattggaccctataggagagggg
aaatttaaggataaggctgagacactgaatagtgtggctagaggggcgacagagaacaaa
actcaggacaaacgtgaagatggtggagataaacctgaggcgaccaaagagcgagaggcg
gccccagcaccggatgagcaggatcaaccagaggacaagaaggaggatgtgccaacagga
gaggatgggtcaggaggctctgacagtgaggaagatgacagtcaagaagatagcaaagag
tccagtgaagaagaagaagaagaagatgaggaggaggaggaggaagaggaggaggagggc
gatgaagaagaagaggagaaagaagatgagcctttgtctttagagtggcctgaaacacga
cgtaaacaagccacctacctcttcctgctgcccatcatcttccctctgtggctcacagtt
ccagatgttcgcaaccagaaatccagacatttctttgccgccacttttctgggctctatc
atctggattgccgttttctcctacttcatggtttggtgggcccatcaggtgggtgagacc
atcggcatctcagaggagattatgggcctgacgatcctggctgcagggacctccatccct
gacctcatcaccagtgtgatcgtggcgcgtaaaggcctgggggacatggctgtgtccagc
tcggtgggcagcaacatcttcgacatcacagtgggtcttccagtgccatggctcctgtac
tcatcgctccacggttttgctccaatggccgtcagcagcaacgggctcttctgtgccatc
gtgctgctcttcatcatgctcctctttgtcatcatctcaattgcatcctgtcattggaag
ttgaataagaggctgggtttcaccatgttcctgctctactttgtcttcctggtgcttagt
gtgatgctggaggatcgcatcattgtctgccctgtttccatctga
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