KEGG   Notothenia coriiceps (black rockcod): 104967375
Entry
104967375         CDS       T04920                                 
Name
(RefSeq) cadherin-2-like
  KO
K18749  protein LSM14
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncc03019]
    104967375
Messenger RNA biogenesis [BR:ncc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104967375
SSDB
Motif
Pfam: LSM14 SM-ATX CADH_Y-type_LIR TAD2 zf-LITAF-like
Other DBs
NCBI-GeneID: 104967375
NCBI-ProteinID: XP_010795086
UniProt: A0A6I9Q549
LinkDB
Position
Unknown
AA seq 496 aa
MSSGGGTPYIGSKISLISKAQIRYEGILSSVDTDRSTVALAKVRSYGTEDRRADRPVPPK
DEMYEYIIFRGSDIKDITVSEPPKQHHGLPRDPAIVQSSMGSSSAAYHPRWSSYRDMMPT
YNQLAATSLLNQQYSTALGLGVPPMTGTSTLNIHVTDQNDNVPQPTVDFVDVCVSDGPSS
TNISAFDLDDHPYAGPFTFELLGDVKGKWKLNPSHGYTAGLVKEPGVYSGPHTVDVKISD
MQGQFAMYNLSVTVCDCNVTPNCRDPRSTATTAAPGALAIVFASLLLIMCLLLMAVFMTC
RKEFAPLEPSDSSGDTLLSSNIENPGTDCKVVVPDDIVVWFTEETHSDPSNWRGQHHGIK
HSNFSKEMEQNLIYEHLVLGEDMSHLYNENWNQTTWRPLMANGHHHTHQREETSTMNFHA
ALQALLHQRLSSLQGKEADLLDYEPHVYAEEGDFDVLSELENIILPDKDSYQKALNNLGP
KFKQLASICKPPHIQN
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagctccggaggagggaccccatatattggcagtaaaataagtttgatatccaaagcg
cagatccggtatgaggggatattgtcgtctgtcgacactgatcggtccacggttgcgcta
gccaaagttagatcctatgggacagaggaccggcgcgcagatagaccagtgccacccaaa
gatgaaatgtatgaatacataatcttcagaggaagtgacattaaagatatcactgtgtcc
gagcctccaaaacaacaccatggactgcctcgggaccctgctattgtacagtcatccatg
ggcagctcttcggctgcgtatcatcccaggtggagttcatacagagacatgatgcccacc
tacaaccagctggctgctacgtctctactgaaccagcagtacagtacagcactaggccta
ggagtgccacccatgacaggcacatccactttgaacatccatgtgactgaccagaacgac
aacgtgcctcagccaacagtggactttgtggatgtgtgtgtgtccgacggcccctccagc
accaacatctcagcctttgacctggatgatcatccctacgcggggcctttcacatttgaa
ctgctgggtgacgtcaaaggaaaatggaagctgaatccctcacatgggtacacagccggc
ctggtgaaggagcctggtgtttattccggaccacacacagttgatgtgaagatctctgac
atgcagggacagtttgccatgtacaacctcagtgtgaccgtgtgtgattgcaatgtgacg
ccaaactgcagagacccccgaagcactgccacaacagctgctcccggggctctggccata
gtgtttgcctcactacttttgatcatgtgtctgcttctgatggcagtgttcatgacctgc
agaaaagagttcgcccctctggagcccagtgattcctctggagacaccctcctgtcatca
aacattgagaatccaggaacagactgcaaggtagtcgtaccggacgatatagtggtatgg
tttactgaggagacccacagtgacccatctaattggagaggacagcatcatgggataaaa
cacagcaatttttccaaggaaatggagcaaaacttaatctacgaacacttagtcttagga
gaagatatgtcccatctatacaacgagaactggaaccagacaacttggagacctctaatg
gccaatggccaccatcatacccatcagcgtgaggaaacgagcacaatgaacttccatgca
gctctccaagccctgcttcatcagcggctctcctctctccaggggaaagaggctgacctg
ctggactatgagcctcacgtttatgcagaggagggcgactttgacgtcctctcagagctg
gagaacatcatccttcctgacaaggattcataccagaaagcactcaacaacttgggcccc
aagttcaagcaactggcctccatttgcaagccaccacatatacaaaactga

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