Notothenia coriiceps (black rockcod): 104967403
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Entry
104967403 CDS
T04920
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104967403 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104967403 (clasp2)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104967403 (clasp2)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104967403 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_DAAF5
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
104967403
NCBI-ProteinID:
XP_010795116
UniProt:
A0A6I9Q555
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MEDHDNMDYFYQQLVQKDVSRRLQVGQDLIDYLNDPDRSSDVEQDKPRLDKTIDELAGWV
NSSNFKVALLGIDICGAFVDRLGERFRGYLCTVLPALVDRLGDGKDQVRENSQALILRCM
EQSASPMFVWERLLPGFKHKNFRSREGICLCLIATLSTYGAQPLSLSKLVPHLCTLTGDQ
NPQVREASIAALVDVYRHVGERVRADLGKRGLPAARLQTLFSRFDEALSSGNMALSPSHD
RSFEDDDSVDGNRSSAQAFKVPKVPKKPEPSAARRPSATGGKLVSKESACGGMDEEDFIR
SFTDVPTVQIYSARDLEDNLNKIREICSDDKHEWDQRAAAMKKIRSLLVAGATTYDCFFQ
HLRLLDGAFKLSAKDLRSQVVREACITVAHLSTLLGNKFDHGAEGIVPVLFNLVPNCAKV
MASSGVAAIRIIIRHTHVPRLIPLIASHCASKSVSVRRRCYDFLDLLLQEWQTHSLERHT
AVLVESIKKGLRDADSEARVEARKAYWGLRNHFPSECDALYNSLEPSYQKTLQSCLKSSG
SVASLPQSDRSSSSSQESLNRPLTSKWSAAPGRVPTVSKGGLSAASLQRSRSDVDVNAAA
VAKHRQVGQARGAGRLTPGSYSSLDDASDKPDGTKSDNGRLRTKQPLSTASSMSSQVDSR
GRSRTKMVSQSQRSEESDCTPGSQSATPVGAGSRSGSPGRVLTTTALSTMSSGAHRVLAG
SSGDKNRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNGAARGARGSRIPRPSMSQGCSR
EASRESSRDTSPVRSFTPLATRSYSRSTGALHAPDVFGAAGSGLGISQSSRLSSSVSAMR
VLNPGSDVEEALADALLLGDMRSKKKPARRRYENYSMYSDDDANSDASSACSERSYSSRN
GGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTR
MFADPHSKRNSGRVYGTAESGISSASFKRVFSMFLETLVDFILVHKEDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQRALDITRDSFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYID
TLTLQMEAPDFVNSSETRLAISRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLA
ALPKTFQDGATKLLQNHLKNTGNAAQAPMGSPLTRHTPRSPANWSSPVTSPTNTSQNTPS
PSAFDYDTENMNSEDIYSSLKGVTEAIQNFSVRSQEDMNEPIHRQGEEGDSGTDFVDGGR
MALDNKTSLLNTPLLSSSPRGARDFLDSPYKHGRKDTSMDDSEQLTDESSLDQSELVAEL
LKELSNHNERIEERKTALCDLLKLIRENALLVWDEHFKTILLLLLETMGDREHVIRTLAL
RVLREILGKQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPDQCVKVL
CPIIQSADYPINLAAIKMQTKVVERVPREGLMSLLPEIVPGLIQGYDNPESSVRKACVFC
LVAIYAVIGEDLKPHLNQLSSSKLKLLNLYIKRAQSGSSGGEPPSDCL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcatgacaatatggactatttttaccagcagttagtgcagaaagatgttagc
cgcaggttgcaggtgggtcaggacctcattgactacctgaatgatccggaccgctcctcg
gacgtggagcaggacaaaccccggctcgataaaaccatcgacgagctggcaggatgggtg
aactccagcaatttcaaggtggcgctgctgggaatagacatctgcggtgcctttgtggac
cggctgggagagcggttcagaggatacctgtgcacagttcttccagctctggtggaccgg
ctgggcgatgggaaggaccaggtcagggagaacagccaagctcttatcctgcgctgtatg
gagcagagtgcctcgcccatgttcgtttgggaaaggctacttcctggttttaaacacaag
aacttccgcagtcgagaaggaatctgcctctgtctcattgccacgctcagcacgtatgga
gcccagccattgagcctcagtaaactggttcctcatctctgcacgttgactggagaccag
aacccacaggtacgcgaggcctccatagcagcactggtggatgtttatcgtcacgttgga
gagagggtccgagcagacctgggaaagagaggactgcccgctgcaaggttacagacgtta
ttctctcgttttgatgaagccttgagttcaggcaacatggctctcagcccgagtcacgat
cgtagttttgaagatgatgacagtgtggatgggaatcgttcttcagcccaggccttcaag
gtcccaaaagttcccaagaagccggagccctccgccgcgcgcaggcccagcgcaaccggt
ggcaagctcgtatccaaggaaagtgcctgcggcggaatggatgaagaggacttcatcaga
tccttcacagatgtccctactgtccagatttactcggcgagggatctcgaagacaacctg
aacaagatccgtgagatctgctccgacgacaaacacgaatgggaccagagagccgccgct
atgaagaagatccgctcactgttggtggcgggcgctaccacctacgactgtttcttccag
cacctccggctactggatggagccttcaaactgtcggctaaagacctgcgctcacaagtg
gtccgagaggcctgcatcactgtggcccacctttcaacattgctggggaataaatttgac
cacggagcagaaggtatcgttcccgtcctgttcaacctcgtcccaaactgcgccaaagtc
atggcctcttccggcgtggcagctatccgcatcatcatacggcacacccacgtccccaga
ctcatccccctgatagccagtcactgcgcatccaagtctgtgtcggtcagaaggcgctgt
tatgacttcctggaccttctgctacaggaatggcaaacccactctttggagaggcacaca
gcagtgctggttgagagcatcaagaaggggcttcgagatgcagactcagaggccagagtg
gaggctcgcaaggcgtattggggtctgaggaaccatttcccatcggagtgtgacgctctc
tacaactccttggagccgtcttaccagaagactctgcagtcctgcctgaagagctccggc
agcgtggcctcacttccccagagcgaccgctcctcgtcctcctctcaggagagcctcaat
cggcctctgacttctaaatggtcagcagctccggggcgagtccctacggtttcaaagggt
gggctgtcggcggcctccctgcagcgttcccgtagcgacgtggatgtaaacgcagcagca
gtcgctaagcaccggcaggtcggacaggccaggggagccgggcgtctgacccctggctcc
tactcctctctggatgatgcctctgataaaccggatgggacgaagtcagacaatggccgt
ttacgtaccaagcagccgctgtccaccgccagcagcatgtccagccaggtggactccaga
ggacgcagccgcaccaagatggtgtcccagtcacaacgttccgaagaatccgattgcacg
ccaggatctcagtctgctacccctgtcggtgctggcagtcggagtggctccccgggtcga
gtgctgacgaccacggccctgagcaccatgagctccggggcccacagggtgctggccggc
tccagcggggacaaaaacagacgcagccgcatcccccgcagccagggctgctccagagac
tcctcccccacacgcctgtctgtcgctccttccagcattagctccatctacaacggagcg
gccagaggagctcggggcagtcgtatccctcggcccagtatgagtcagggctgcagcaga
gaggccagcagggagagcagccgggacaccagccccgtacgctccttcactcccctcgca
acgcggagctactctcgctccaccggagcgctccacgcacctgacgtttttggtgctgca
ggatcaggtttaggtatcagtcagtccagtcgcctctcttcttcagtcagcgccatgagg
gtcctcaacccaggctcagacgtcgaagaggctcttgcagatgcattgctgttgggagac
atgcggtctaagaagaagccagcacggcggcggtatgagaactacagcatgtactctgac
gacgacgctaacagcgacgcgtccagcgcctgctcagagcgctcctacagctcaaggaac
ggaggagccatccccacctacatgaggcagacagaagacgtagctgaggtgttgaaccgt
tgtgccagtgctaactggtcggagaggaaggaggggctgttgggcctccaggcgctgctg
aagaaccagcgcaccctcagtcgggtagagttgaagaggctgtgtgaaatcttcaccagg
atgtttgcagacccccacagtaagcgaaactccggcagagtgtacggcacggcagaatcc
ggtataagctcagcctccttcaagagagtcttcagtatgttcctggagacactggtagat
ttcatcctggttcataaggaggatctgcaggactggctgttcgtcctgctcacacagctt
ctgaagaagatgggagcggacctgctgggttctgttcaggccaaagtccagagagcgctg
gacatcacacgagactcgttccccaatgacctgcagttcactattctcatgaggttcact
gtggaccagacacagacgccaaacctcaaggtgaaggtggcgattctgaagtacatcgac
acgctgacgttacagatggaggctccagactttgtgaactccagcgagactcgactggcc
atctcccgcatcatcacctggacgaccgaacccaagagctctgacgtcagaaaggcagcc
cagtcggtgttaatctcgctcttccagctcaatactccggagttcaccatgctgctggca
gctctgcccaaaacctttcaggacggagccaccaagctgcttcaaaaccatctgaagaac
actggcaacgctgcgcaggcaccaatgggcagccctctgacgcgccacaccccccggtct
cctgcaaactggtccagcccggtcacatcgcccaccaacacctcccagaacaccccctca
ccaagtgcatttgactacgacacagagaacatgaactcggaggacatctacagctctctg
aaaggcgtcactgaggccatccagaacttcagcgtccgcagccaggaggacatgaacgaa
cccatccaccggcagggagaggagggagacagcggaacggactttgtggacggaggccgc
atggctctggacaacaagacgtccctcctcaacacccccctgctgtcctccagcccccga
ggggcccgagacttcttagactctccctataaacacggccgcaaagacaccagcatggac
gactcggagcagctcacagatgaaagcagcctggaccaatcagagctggtggccgagctg
ctgaaagagttgtccaatcacaacgagcgcatcgaggagaggaagacagcgctgtgcgat
ctgctgaagctgatccgcgagaacgcgctgctggtgtgggacgagcacttcaagaccatc
ctgctgctcctgctggaaaccatgggagacagagagcatgtgatccgaacgctggctctg
cgggtgctgagagagattctggggaagcagccctggaggtttaaaaactatgcagagctc
accatcatgaaggccctggaggctcacaaagacccccacaaggaggtggtgcgagcagca
gaggagacggctgccatgttggcgttgtccatcagtccagaccagtgtgtcaaagtgttg
tgtcccatcatccagtcagctgactaccccatcaacctggctgccatcaagatgcagacc
aaggtagtggagagggttccccgcgagggcctgatgagcctgctgccggagatagtgcca
ggactcatacagggttacgacaaccctgagagcagtgtaaggaaagcctgtgtgttctgc
ttggttgccatttacgcagtgatcggagaggacctcaaaccgcacctcaaccagctctcc
agcagcaagctgaagctgttgaatctgtacatcaagcgcgcccagtccggctccagtggt
ggtgagcccccgtctgactgcctatag
DBGET
integrated database retrieval system
