Notothenia coriiceps (black rockcod): 104967509
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Entry
104967509 CDS
T04920
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04260
Cardiac muscle contraction
ncc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104967509
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104967509
04261 Adrenergic signaling in cardiomyocytes
104967509
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104967509
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104967509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
Cache_3-Cache_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
104967509
NCBI-ProteinID:
XP_010795290
UniProt:
A0A6I9Q347
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MAIGKGSCSIVCLVSIQIILIFSASWPGAAGLTFPQQYTIMHWARRIEQEIDRVFQHITG
AQQLKGIYNEERRRFSLVKNQPRRIVEKVASDIEKLLAKKRKALVRLASEAERLQREHIW
QDGIKELDMAYYDSKAEMDYYSMEGEGEVENPSHIKLEFVYDANFKNDVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPASPWKTPNKID
LYDVRRGPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVEDLLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDAVIQMQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSEAKQVQWTNVYQDALGLGMVVTGTLPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIYAIDPNGYLLLHPNLQPKLVNFL
EPVTLDFLDAEVEDVNKEEIRRQMIDGRPGEMQVKTLVKSIDEQYIDDVYRSYTWTPING
TDYSLGLVLPTYNEYFIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKRLHLSD
NNTQFLQNFLSLMLEISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNIAAELWAEDPEPFNSNYYRRSLDNKGYMFRAPSRSSLDDLVGGENGT
VGILVSSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDSRQGSQKCGPSRSCE
MDCEVNTDDLLCYLLDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIFNRRQSF
HFQSACEPVNDSQTGSATRGIFVPSIADILSLAWWTSTVAWSVTQQLLYGLAYNSWFYQD
DLLVDGFETRESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAET
LPCSSCEIERLTLMRTEFQEENPCEVLRNARYRKGPASCFDYSALENASECGRGHALQSS
IGVLLFIQLILPLVHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaagggtcttgcagcatcgtctgcttggtatctatccagattatcttg
attttcagcgcgtcgtggcctggagcagcgggtctcacattccctcagcaatacacgata
atgcactgggccaggcgtatcgagcaggagattgacagagtctttcagcacatcactgga
gctcagcagttgaaagggatatacaatgaagaaaggcgacggtttagtctggtgaagaat
cagcctcggaggattgtggagaaggtggcctcagatatagagaaactcctggctaagaag
cgcaaagcacttgttaggttagccagtgaagcagagcggctccagcgagagcatatatgg
caggatggaattaaggagctggacatggcttactatgactccaaggcagagatggattat
tactccatggaaggagaaggagaggtggaaaacccctcgcacatcaagctggagtttgtc
tacgatgcaaacttcaaaaacgatgtcaactattcctacacagctgttcagattcctaca
gatatttataaaggagctccagtcattctgaatgagctgaactggacgcaggcgctggag
aaagttttcatggagaacagtcaggaggatccgtcccttctgtggcaggcgtttggcagt
gcgacgggcgtcactcgctactacccagcttcaccttggaagacccccaataaaattgac
ctttatgacgtcaggagggggccctggtacatccagggagcctcgtcccccaaagatatg
gtcattcttgtggatgtgagcggcagtgtcagtggtctcactctgaaactcatcaaagcg
tcagtggaggacttgctggacactttgtctgatgatgactatgtcaatgtggccaggttt
aacgagaaggccgaggccgtggttccctgcttcaaacatcttgtccaggctaacgtccgc
aacaaaaagatcttcaaagatgctgtgattcagatgcaggctaaaggcaccactgactac
aagtctggatttcattttgctttcaaccagctgttaaataagacaaatgtccctcgggcc
aactgcaataaaataatcatgctgtttactgatggaggcgaagacagggctcaggatgtg
ttcatgcagtacaactggcccaacaaaacggttcgagtattcaccttttcagtgggccag
cacaactatgacgtcacacctttacagtggatcgcctgcaccaataagggttactatttt
gagatccgttccatctgtgctataaggattaacacccaggaatacctggacgtgctgggg
cgccccatggttctggcaggcagcgaagccaagcaggttcagtggaccaatgtgtatcag
gatgctttgggtcttggcatggtagtaactgggactttgcctgtgtttaatctcaccatg
gatggaaattcacagaatcagctgattttaggtgttatgggagtcgacgtgcatcttgac
gagataaagcgacttacaccacggtacaatcttggagccaatggctacatatatgccatc
gatccaaatggatatcttctccttcaccctaatcttcagccaaagctggtgaacttcctg
gagcctgtgacgctggacttcctggatgcagaggtggaggacgttaataaagaggagatc
cggcgacaaatgattgatggaagaccaggtgaaatgcaggtcaaaacccttgtcaagtcg
attgatgagcagtacattgatgacgtctacaggagttacacctggactcccatcaacggt
acagattacagtcttggtttggtattacccacctacaacgagtacttcatccaggcagac
ctgagtgatgtgatgctgcagctccagtatatgcagtccctgctgcccagctcctttgaa
tcttcaggacatgtgtttcttgctccaagggaatactgcaaacgtctgcatctttctgac
aacaacacccagtttttgcagaacttcctctcgctcatgctggaaatttctccagaatct
gatgagtgtgaccaaggcctcatccataacctgattttggattccaggattatcgggcag
ctggcctctcgtgtttggaagaacaaggacctgaattcgtatggcttcctggctgtattt
gcgtccactgatggaggaataacacgtgtttttcccaatatagctgctgagttatgggct
gaggatcctgaaccattcaattcaaactactacagacggagcctcgacaacaaaggctac
atgtttagagctccatcgagatcctcattggacgaccttgttggtggagaaaacggcacg
gttggaattcttgttagttcggctgtggaggttaatttaggaggcaaactgctcaaacct
tcagtggtcggggtgaagctggacttggaggcatgggtggacaagtttaagatcctggcc
agcaacgtgtcggacagtcgacagggctcacagaagtgtggaccatccagaagctgtgag
atggactgtgaagtgaacactgatgacctcctctgctatctcctcgatgatggtggattt
ctggttatgtccaatcagagagatcactggaaaaagattggccttttcttcggtgatgtg
gacccttacttgatgcacgctctctacaacaactcaatcttcaatcgccgtcagtctttc
cacttccagtctgcatgtgaaccggttaacgacagccaaacgggttcagcaacgaggggc
atctttgtgccgtccattgctgacatcctcagcttggcctggtggacgtccacagtggca
tggtctgtgacccagcagctcctgtatggactggcatacaacagctggttctaccaagat
gatcttctggttgatggttttgagacaagggaaagcagctgtgtgaccatccaaagccag
ttctactttacaaacaccactaactcctacaacgtgctgcaggactgcgggaactgctcc
cggctgttccacgcgaagcggatagaaaacaccaacctcctctttgtggtcgcggagacg
ctcccctgcagctcatgtgagatagagagactgacactgatgaggacagagtttcaggag
gagaatccatgcgaagtactgagaaacgcgcgatatcgtaaaggcccagcatcatgcttt
gactacagtgccttagaaaacgcgtcagagtgtggacggggtcatgccctgcagtcttca
ataggagtccttctctttatccagcttattctgcctcttgttcatctctga
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