Notothenia coriiceps (black rockcod): 104967810
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Entry
104967810 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 2 protein-like
KO
K06839
slit 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104967810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncc00536
]
104967810
Glycosaminoglycan binding proteins [BR:
ncc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104967810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRRCT
LRR_1
LRR_9
EGF
EGF_TEN
LRR_EndoS
hEGF
EGF_C8A_B_C6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104967810
NCBI-ProteinID:
XP_010795647
UniProt:
A0A6I9Q681
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MVEATQPQPGSRAGGDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGAFRALRDL
EVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCNVAWLSEWLRQRPRLGLYTQCM
APPHLRGHNVAEVQKKEFACTGHQSSSSSSCSVIQCPESCTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNSLSGTE
DYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEA
TGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILTSNRLENVHHLMLKGLGGLRT
LMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLHSLSTLNLLANPFNCNC
HLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAAQDFACEDGNNENSCSPVLRCPAE
CSCLDTVVRCSNKGLNTLPKGLPKETTELYLDGNHFTQVPVELSDYKHLTLIDLSNNQIS
TLSNHSLSNMSELLTLFSSVSLPGRALGANPLYCDCHMQWLSDWVKSGYKEPGIARCTGP
GDMTDKLLLTTPSKKFTCSGPVDMNIQAKCEPCLSNPCKNDGSCSNDPVNYYRCNCPFGF
KGQNCEEPIHACISNPCHNGGTCHLKEGEESNFWCVCPEGFEGDACEINIDDCEDNDCEN
NSTCVDGINNYTCMCSAEYTGELCEKKLGFCASDLNPCQHDSVHLTPQGYSECECTPGYV
CEHCELDYDDWCGQFNTEPLFYCFDHGQG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggccacgcagccacagccggggtcaagagctggaggtgatctcagcgagaac
caaattcagggggttccacggaaagccttcagaggagctgtggagatcaagaacctccag
ttggactacaaccacatcagctgtattgaagatggagctttccgagcgttacgtgacctg
gaagtgctcaccctcaacaacaacaacatcagccgtctgtctgtggccagtttcaaccac
atgccgaagctaaggacctttcgcctgcactccaacaacctgcagtgtgactgcaacgtg
gcctggctgtcagagtggctgcgacagcgaccccgcctgggtctctacacacaatgcatg
gcccctccacacttgagggggcacaacgtggctgaggtgcagaagaaggagtttgcctgc
acaggtcaccagtcgtcatcatcttcctcctgcagtgtgatacagtgcccagagtcctgt
acctgcagtaacaacatcgtagactgcagagggaagggactgacagaaatacccaccaac
ctgcctgaaaccatcactgagatacgactggagcagaacgccatcaaggtgatcccagct
ggagccttttctccttataagaagctgcgcaggattgacttgagtaacaaccagatttcc
gagttagcctcagacgccttccaaggtctgcgctccctcaactctctatcaggtactgaa
gattaccgcagtaagcttggaggggactgcttcgccgacttggcctgcccagagaagtgc
cgctgtgagggcaccacggtggactgctccaaccagaaactcaccaaaataccagatcac
atcccccagtacaccgccgaactgcgtctgaacaacaatgaattcactgtgctcgaggcg
acagggatcttcaaaaagttgcctcagctgagaaagattaacctgagcaataaccgtatc
actgacatagaggaggggacatttgaaggagcctccggggtcaacgagttgatcctgacc
tccaacagactggagaacgtacaccacctcatgctgaagggactcggtggcctccgcaca
cttatgctgaggagtaatcgtatcagctgtgtgagtaacagcagttttgtggggttgagc
tccgttcgtctgctgtcgctctacgacaaccagatcacctccatgaaccctggagccttc
gacacattgcactccctgtccacactcaaccttctggccaatccctttaactgtaactgt
cacctggcctggctcggtgattggctcagaaggaaacgcatcgtcacgggtaaccctcgc
tgccagaatccttatttcttgaaggagatccccatacaggatgtagctgcccaggacttt
gcctgtgaagatggtaacaacgagaacagctgctccccagtgctgaggtgtcccgcagag
tgctcctgtctggacacggtggtgcgctgcagcaacaagggcctcaacacgctgcccaaa
ggcctgcccaaagagaccaccgaactgtatcttgatggcaaccacttcactcaggttcct
gtggagctctccgattacaaacacttaacactcattgatttgagtaacaaccagatcagc
acgttgtccaaccacagcctcagtaacatgtccgagctgcttaccctgttctcctctgtc
tccctgcctggcagggctctgggggccaaccctctgtactgtgactgccacatgcagtgg
ctgtcagactgggtgaagagcggctacaaggagcctggcatcgcccgctgcaccggccct
ggtgacatgaccgacaaactgctgctcacaacgccttccaagaagttcacctgctcaggt
cctgtagatatgaatatccaggccaagtgtgagccttgcctgtctaacccctgcaagaat
gacggctcctgctccaacgacccagtgaactactaccgctgcaactgcccctttggattt
aagggacaaaactgtgaagagcccattcatgcctgcatcagtaacccatgccataatgga
ggcacttgtcacctgaaggaaggagaagagagcaacttctggtgtgtttgtccagagggc
tttgaaggcgacgcatgtgagatcaacatcgatgactgcgaagacaacgactgtgagaac
aactccacctgcgtcgatggaatcaacaactacacttgcatgtgctcagcagaatacaca
ggggagctatgtgagaagaaactgggattttgcgcctccgacctgaacccttgtcagcat
gactcagtgcatttgacccctcagggatacagtgagtgtgagtgcactccagggtacgtg
tgtgagcactgtgagctggactacgatgactggtgtggacaattcaacactgagcctctg
ttctactgtttcgatcacggtcagggttag
DBGET
integrated database retrieval system
