Notothenia coriiceps (black rockcod): 104967833
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Entry
104967833 CDS
T04920
Symbol
lsm8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104967833 (lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
104967833 (lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104967833 (lsm8)
03041 Spliceosome [BR:
ncc03041
]
104967833 (lsm8)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104967833 (lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
104967833 (lsm8)
Spliceosome [BR:
ncc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104967833 (lsm8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
104967833
NCBI-ProteinID:
XP_010795665
UniProt:
A0A6I9Q653
LinkDB
All DBs
Position
Unknown
AA seq
67 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSNQGVEQVVLGLY
IVRGDNV
NT seq
204 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggccctggagagctacatcaaccgaactgtggccatcgtgacgtcagacggc
aggatgatcgtgggcactctgaagggcttcgatcagaccatcaacctgattctggacgag
agccacgagcgagtgttcagctcgaatcagggcgtggagcaggtggtgctgggcctctac
atcgtgaggggggacaacgtgtga
DBGET
integrated database retrieval system
