Notothenia coriiceps (black rockcod): 104968033
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Entry
104968033 CDS
T04920
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03030
DNA replication
ncc03410
Base excision repair
ncc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104968033 (pole2)
03410 Base excision repair
104968033 (pole2)
03420 Nucleotide excision repair
104968033 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncc03032
]
104968033 (pole2)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104968033 (pole2)
Enzymes [BR:
ncc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104968033 (pole2)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104968033 (pole2)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104968033 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
104968033
NCBI-ProteinID:
XP_010795881
UniProt:
A0A6I9Q6N3
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MDVARKIKTKVSAGFKMRGLILRPEASKYLLEVLESVNATELDDIIEKVLDAVEKQPLSS
NMIELSVVESAVQDCTQSCDENIDNVFNIIGAFDVPRYIYSSERKKFVPISMTSHTASSL
CGLARDKAEFFRERYTILQQRIHRHQLFTPPAIGAAVEEGQNKFQLKTIEALLGSTAKLG
EVIVLGMITQLKEGKFYLEDLSGTVQLDMSKAQFHNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTESSSGTRAYYGNLNFFGGPSTTSVKASAKLKQLEAENEDAMFVIVSDVWLDSVE
VMEKLNVMFSGYATMPPTCFIFCGNFSSAPYGKTQIKSLKESLKVLADAICSYPSIHSSC
RFVFVPGPEDPGPGSILPRPPLADHITEEFRERVPFSVFTTNPCRIQYCTQEIVIIREDL
VNKMCRNCVRLPNNNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPIPDVII
FADKYDPFSIKNTDCLCVNPGSFPKSGFTFKVYYPASRTIEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgctcgcaaaattaagacaaaagtgtccgctggcttcaagatgcggggactt
atacttcgacctgaagccagcaaatacctactggaggtcctggagtctgtcaatgccact
gagctggatgacattattgaaaaggttctggatgcagtggaaaagcaaccattgtcctct
aacatgatagagctgtctgtggtggagagtgctgttcaggattgcactcagtcttgtgat
gaaaacatagataatgttttcaacatcattggagcctttgatgtgcccagatacatttac
agttcggagcggaagaaatttgtacccattagtatgacaagccatacagcatccagtctg
tgtggtttggccagagacaaagctgagttcttcagggagcgctacaccatcttgcaacag
cgtatacatcggcaccagctcttcacccctcctgcaataggagctgctgttgaagagggt
caaaacaagtttcagctcaagacaattgaagcactgcttggcagcacagctaaactggga
gaagtgatcgtactggggatgatcacacaactgaaagagggtaaattttacctggaggac
ctaagtggaacagtacaactggacatgtccaaagcacagtttcataatggcctgtacaca
gaatcctgctttgtgctggcagagggttggtacgaggactcggttttccacgtcaatggc
tttgggttcccaccaacagagtcgtcatcaggcacaagagcatactacggcaatctcaac
ttctttggcggtccatccaccacctcagtgaaggcctcagccaagctgaagcagctggag
gcagagaatgaagacgccatgtttgtcattgtctctgatgtgtggctagacagcgttgaa
gtgatggagaagctcaatgtcatgttctcaggctatgctacgatgcctcctacctgtttc
attttttgtggaaacttctcgtctgccccatatggaaaaacacagatcaaatctctcaaa
gagtcattgaaggtgcttgctgatgctatatgttcataccccagcattcacagcagttgt
cgctttgtgtttgttcctggcccagaagaccccggtcctggcagcatcctgccacggcct
cccttggcagatcacatcacggaggagttcagagagagggtgccattttcagtgttcact
actaacccatgcaggatccagtactgcacccaggagatcgtcattatcagagaagacctg
gtcaacaagatgtgcaggaactgtgtccggttgcccaataacaatctggacattccaaac
cattttgttaagaccatcctatcccagggtcacttgactccactgcctctgtatgtcagt
cctgtattctgggcgtacgactactccctgcgggtatacccaatccctgatgtcatcatc
ttcgcagacaaatacgacccattcagcatcaaaaacacagactgcctgtgtgtcaacccg
ggttcgttcccaaaaagtggcttcacatttaaggtgtactacccagccagcagaactatt
gaggacagcaaacttcaaggactctaa
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