Natranaerofaba carboxydovora: ACONDI_00165
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Entry
ACONDI_00165 CDS
T07970
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACONDI_00165 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncd03400
]
ACONDI_00165 (uvrB)
DNA repair and recombination proteins [BR:
ncd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACONDI_00165 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACONDI_00165 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
SWI2_SNF2
YonA_C
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UMZ72641
LinkDB
All DBs
Position
186631..188634
Genome browser
AA seq
667 aa
AA seq
DB search
MKNNFNLNMDFPPKGDQPKAIDELVDSIEKGDKNQTLLGVTGSGKTFTMANVIQKVQKPT
LVIAHNKTLAAQLCSEFKEFFPENAVEYFVSYYDYYQPEAYIPQTDTYIEKDSSINDEID
KLRHSATNAILERRDTIVVASVSCIYGLGSPGDYSDQVLSLRRGMVKDRDEIIKRLVEIQ
YSRNDINFTRGTFRARGDVLEVFPASFTERAIRIEMFGDEIDSMSEIDTLTGEIMAEREH
VAIFPASHFVTGKDRLKQAISSIEKELNERLQEYKEQGKLVEAQRLEQRTNYDLEMLQEM
GFCQGIENYSRHLTNREPGSRPYCLLDFFPDDYLIIVDESHMTLPQIRGMYQGDYSRKKT
LVEHGFRLPSALDNRPLKFEEFEKMINQALYVSATPGPYEKENSTRIVEQIIRPTGLLDP
SVDVRPIKGQIDDLHSEIKKREERKERVLVTTLTKKMAEDLTDYLKELGVRVRYMHSEID
TIERMEIIRDLRLGNFDVLVGINLLREGLDLPEVSLVAILDADKEGYLRDERSLIQTMGR
TARNEQGHVIMYADEITDSMRNAIDETYRRRKIQQEFNEKHGITPQTIQKDVREVIEATK
TVQNSNIKNLKDKKLDKINKKDADKVIEDLKSEMKEAAKNLEFEKAAELRDIIAELELKS
KGKSSYA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaattttaatttaaatatggattttcctcctaaaggagatcaaccaaaggct
attgatgagcttgttgatagtatagaaaaaggtgacaaaaatcaaacacttcttggtgtc
acaggctcaggcaagacctttacaatggcaaatgtaattcaaaaagtacaaaaacctact
ttagtcatagcacacaacaaaactcttgcagctcagttatgcagcgaatttaaagagttt
tttcctgagaatgcagtggagtatttcgttagttactatgattattatcaaccagaagct
tatataccacaaacagatacctatatagagaaagattcttcgattaatgatgagatagat
aagttaagacactcagctacaaatgccattttagaacggcgcgataccatcgttgttgca
agtgtctcatgtatatatggccttgggtcgccgggagattacagcgaccaggtgctatct
ttacggagagggatggtcaaggatagagacgagataattaaaagacttgtggaaattcaa
tatagtaggaatgatattaattttacccgggggacttttagggctagaggagacgtgctt
gaagtttttccggcttcttttaccgagagagcaatacgaatagaaatgtttggtgatgag
attgatagtatgagtgaaattgataccttgactggtgaaattatggctgagagagaacac
gttgcaatcttccctgcgtctcacttcgtcaccggtaaagacaggctaaagcaggctatt
tcgagtatagaaaaagaactaaatgaaagacttcaggaatataaagaacagggtaagtta
gttgaagctcaaagattagaacaaaggacaaattatgaccttgagatgcttcaagagatg
ggcttttgtcagggaatagagaactattcacggcatctgacaaatagagaacctggcagt
agaccatattgtttacttgattttttccccgatgattatctaataatagttgatgagtct
catatgacactgccccagattagagggatgtatcagggggactattccaggaaaaagact
ttggtagaacatggatttagactaccatctgctttggataacaggccgttaaaatttgag
gagtttgagaagatgataaatcaggctctgtatgtttctgctacacctggtccatacgaa
aaggaaaacagcacaagaattgttgagcagataattcgtccaacaggtttacttgaccca
tctgtggatgtaagaccgataaaaggccagatagatgatcttcacagcgaaatcaaaaaa
agagaagaaagaaaagaaagggttcttgttaccactttgactaaaaagatggctgaagac
ttgactgattaccttaaagaactgggtgttagagtaaggtacatgcactcagaaatagat
actatagagcgaatggaaataataagagatttgagactaggaaattttgatgtacttgtt
ggtataaaccttctaagagaagggcttgatcttccagaggtaagtcttgtggcaatttta
gatgccgacaaggaaggttatctgcgcgacgagagatctttgatacagacaatgggaaga
actgctagaaatgaacaaggccatgttataatgtacgctgacgaaattactgactcaatg
cgaaacgcaattgatgaaacttatagaagacgtaagattcagcaggaatttaatgaaaaa
cacggaataactccacaaactattcaaaaagatgtccgtgaagtgatagaagctaccaag
accgttcaaaatagcaatatcaaaaatttgaaagacaaaaagctagacaagattaacaaa
aaagatgcagataaagttattgaagacctaaaatctgagatgaaagaagctgcaaagaac
ttagagtttgaaaaggcagcggaacttcgtgatataatagcagagctagagttaaaatca
aagggaaagagtagttatgcatag
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