Natranaerofaba carboxydovora: ACONDI_00166
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Entry
ACONDI_00166 CDS
T07970
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACONDI_00166 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncd03400
]
ACONDI_00166 (uvrA)
DNA repair and recombination proteins [BR:
ncd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACONDI_00166 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACONDI_00166 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_23
AAA_16
nSTAND1
nSTAND3
DnaJ_CXXCXGXG
nSTAND6
Viral_helicase1
NACHT
ExoX-like_C
cobW
LIP-1
Motif
Other DBs
NCBI-ProteinID:
UMZ72642
LinkDB
All DBs
Position
188647..191511
Genome browser
AA seq
954 aa
AA seq
DB search
MIMKEKLIIKGAREHNLKNVSLEIPRDKLIVMTGISGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLGQMDKPDVDYIEGLSPAISIDQKSTTKNPRSTVGTVTELYDYLRLLFARIGL
AHCPHCHEAISQQSVDQMVDQIMTLPEAKKFQILAPVIRGKKGQHVKLLEEIKKSGFVRV
RVDGEIRLLSEEINLDKNKTHTIEVVVDRLKMKEGLENRLADSLESALSLSNGLVKIHLI
EEDEEMSFSQKHACIDCGFSFEEITPRMFSFNSPYGACPKCDGLGAKKEIDPDLIIPDQS
LSLSEGAIVPWSRNKGYYYQLLTSFCNHFGIDMNKPFEELSDEEKNAIFYGSTEEKFLFS
YENKWGRVKERMRYFEGVIPNLERHYIETSSDNFREEIEKYMTSKNCNSCKGKRLREESL
AVKIDGYDIGDITEMTVDEAIRFFDELDLTEREYKIGELVLKEINERLGFLKNVGLEYLT
LERAASTLSGGEAQRIRLATQIGSSLTGVLYVLDEPSIGLHQRDNERLIRTLENLRDLGN
TLIVVEHDEATMRRADHIVDIGPGAGEKGGEVVAEGTVEEIMEYEDSITGKYLNGKKAIS
VPEKRRKPNDKFLEIKKAREHNLKNVNVKIPLGVFNCVTGVSGSGKSTLINEILFKALSQ
KLHRAQKKPGAYSEIKGIEHLEKVIEIDQSPIGRTPRSNPVTYTGVFDAIRELFSETPEA
KMRGYKPGRFSFNVKGGRCESCKGDGIIKIEMHFLPDVYVKCEVCKGKRYNRETLEVKYK
GKTIADVLDMTVDSALEFFASIPKIRRKLQTLSDVGLGYIRLGQPATTLSGGEAQRVKLA
SQLSRRSNGKSLHILDEPTTGLHMDDVYKLIRVLERLVEEGDTVVVIEHDLDVIKRADYI
IDLGPEGGEKGGRLVASGTPEKIAENEKSYTGRYLKEILDTNALKLEHKKQELA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgattatgaaggaaaaattaatcataaaaggtgcaagagaacacaatctaaaaaacgtc
agtctggaaataccaagggacaaacttatagttatgactgggatctcaggttctggcaag
agttctcttgcttttgatactatatatgccgaagggcagcgccggtatgtggaatctcta
agcgcttatgctagacagttccttggtcagatggataagcctgatgtagattatattgaa
gggttaagtccggccatatctattgaccaaaaatccaccaccaaaaaccctcgttcaacc
gttggtacagtaacagagctatatgattatttaagacttttatttgccaggattggcctg
gcgcactgtccccactgtcacgaagcaatatcacagcagagtgttgatcaaatggtggat
caaataatgaccctgcctgaagcaaagaagtttcagattttggcccctgtgattagggga
aagaaaggtcagcatgtaaagctgctagaagagatcaagaaaagcggttttgtcagggtc
agagtagatggtgagataaggcttttgtctgaagagattaatcttgataaaaataaaacc
cacaccatagaagtagtagttgatagattaaagatgaaagaaggccttgagaatcgtttg
gcagattcactagaaagtgctcttagtctaagcaatggccttgtaaaaattcatctaatt
gaagaagatgaagaaatgagttttagtcaaaaacatgcctgtattgactgcggttttagc
tttgaagaaataacaccaaggatgtttagctttaacagtccttatggcgcatgccctaaa
tgtgatggtcttggtgccaaaaaagagatagatccagaccttattataccggatcaaagc
cttagcttatcagaaggagctatagtcccctggagtagaaataaaggctattactatcaa
cttttaacctccttttgtaatcattttgggatagatatgaataagccctttgaagagtta
tcagatgaagaaaaaaatgcaatcttttatggctctactgaggaaaagtttttgtttagt
tatgaaaacaaatgggggagagtaaaagaaagaatgagatacttcgagggagttatcccc
aacttagagcgtcattatatagagacttcatcggataattttagagaagagattgagaag
tatatgacctcaaaaaactgcaacagctgcaaaggaaaaagattgagggaagaaagtctt
gctgtaaaaatagatggttatgatattggtgatataactgagatgacagtggatgaagct
attagattttttgatgaactagatttaacagaaagagaatacaaaatcggagaacttgtc
ctaaaagagataaatgaaagacttggttttctaaaaaacgtcggcttagaatatcttacc
ctagaaagggcagctagcactttgagcggaggtgaggctcaaaggataaggcttgctacc
cagattggctctagcttaacaggggtgctttatgttctagatgagccaagtataggactt
catcagagggataatgagagattaatcagaacccttgagaacctcagagatcttggtaat
actttgatcgttgtagagcatgatgaggctactatgagaagggctgatcacattgttgat
attggtcctggcgcaggtgaaaaaggcggagaagttgttgctgagggtactgttgaagag
attatggaatatgaagactctatcacaggcaaatatcttaatggcaaaaaagccatctct
gttcctgagaaaagaagaaaacctaatgataaatttttagagatcaaaaaagcaagagag
cataatctgaaaaatgttaatgtgaaaattccccttggagtctttaattgtgtcaccggc
gtatcagggtccggtaagagcaccttaataaatgaaatactctttaaagcattatctcaa
aaacttcacagggctcagaaaaaaccaggagcttatagcgagattaaagggatagaacat
ctagaaaaagtaatagaaattgatcagtctccaataggcaggactccaaggtctaatccg
gtgacttacacgggtgtatttgatgctattagagaacttttctcagaaacacctgaagct
aagatgagagggtataaacctggcaggtttagctttaatgtcaaaggaggaagatgtgaa
tcctgcaagggtgatgggataataaaaatagagatgcactttttgccggacgtctatgtt
aagtgtgaagtatgtaagggtaaaagatataacagagagacattagaggtcaaatacaaa
ggtaagacaatagcagatgttcttgatatgacagtagatagcgctctagaattttttgca
tctataccaaagatcagaaggaaactgcagaccctttcggatgttggtctaggttacatt
cgccttggccaacctgcaactactttgtctggtggtgaagcccagagggttaaacttgca
tcacagcttagcagaagaagcaacggaaaaagcctgcatattcttgatgagcctacaaca
ggactgcacatggacgatgtttataaacttattagggtccttgaaaggcttgtagaagaa
ggggatacagtggttgtaattgaacatgacttggatgtaattaagagagcggattatatt
atagacctgggtcctgaaggaggcgaaaagggaggaaggcttgtagcttcaggtacaccg
gaaaaaattgcagaaaatgaaaaatcatacacaggaaggtatttgaaagaaattttagat
acaaatgctctaaaattagagcacaaaaagcaggaacttgcatga
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