Natranaerofaba carboxydovora: ACONDI_00346
Help
Entry
ACONDI_00346 CDS
T07970
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ncd
Natranaerofaba carboxydovora
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncd03016
]
ACONDI_00346
Enzymes [BR:
ncd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ACONDI_00346
Transfer RNA biogenesis [BR:
ncd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ACONDI_00346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UMZ72816
LinkDB
All DBs
Position
392196..392753
Genome browser
AA seq
185 aa
AA seq
DB search
MRLFYAIFFDKKIIETLVQNQEYIKNYGINGRFVRRNKLHLTLKFLGETEEKNLLQIKNS
VNPSEINPFKIKLSDLGVFPPKGRPRVIWQGLEGETEKDAEEMLKLKNLLEENLEDLGFE
KEKRKFKPHITLVRDPKNLNKNDLDNILLKKMTTNVTSFSLMSSKLTKSGPIYDELCRYD
LNTKY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttttttatgcaattttttttgataagaaaattattgagacccttgtacaaaac
caggagtatatcaaaaattatgggataaatggaaggtttgtaagaagaaataaactacac
cttacacttaaatttttaggtgaaacagaagaaaaaaatttattgcagatcaaaaattca
gtaaacccatcagaaattaatccttttaaaataaagctttctgacctaggtgtttttccg
cctaaaggaagacccagggttatttggcagggtttagaaggagaaacagagaaagatgca
gaagaaatgttaaaactaaagaatttattagaagagaatcttgaagatttaggttttgaa
aaagaaaaaagaaagtttaaaccacatattactcttgtccgagatccaaaaaatttgaac
aaaaatgacttggataatattcttttaaaaaaaatgactaccaatgtgacatctttttct
ttgatgtcaagtaaacttacaaaaagcggcccaatttatgatgagttatgtcgctatgat
ttaaatactaaatattga
DBGET
integrated database retrieval system
