Natranaerofaba carboxydovora: ACONDI_00408
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Entry
ACONDI_00408 CDS
T07970
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd00550
Peptidoglycan biosynthesis
ncd01100
Metabolic pathways
ncd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACONDI_00408 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACONDI_00408 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncd01011
]
ACONDI_00408 (mrdA)
Enzymes [BR:
ncd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACONDI_00408 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ncd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACONDI_00408 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UMZ72871
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Position
443489..445366
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AA seq
625 aa
AA seq
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MTEDKVFKKRLIGFFVISFLILLALMSRLFYFQIVHGEHYQAVSEENRMRRVNIPPPRGE
IFDRQGTVLARNSPGYTVSLMDVPEQDEDDFIDELSEILDIDRETIEARMTSQRYRRFEP
VPLKSDVDYETVSYLEEKRTEFPGVVIEVAPTRNYPDGKYASHLLGWMGEISREELENGM
REVGYRPGDYIGKSGIESVFEKYLRGEEGVRQIEVNRFGSIVTEMGQEEPEPGNDLQLTL
DFELQKDLTKSLDEARFEAKEDKKEDARQDGLDPDSIEAKGAAGMVLDPDSGGILSMVST
PQFNPETFGKDYNELQSDPLNPVRNRVLREKYPPGSTFKMVTAVAALEENEITGGETIHD
QGRYWEPPYPRNYGGIAHGRISMVEAMAKSSNVYFAELGNRLGIDKLSSWSREFGFGNYV
GLEDISGELSGDLAGREIKQQIYSEPQHSIWFPGDTLNAALGQGYHSYTPLQMGNYAAMV
ANKGIHYRPYLVDKIYDDDEVIEKSSPETLREIEVNERTWELVREGMRDASLPGGTAGQL
SEDLPFDVAVKTGTAETGSGREPHSWMVGFAPYDDPEIAFALIVENGGVAGARLTPVARD
LIDSYFDLGIDEVEIEEDATGEITY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagacaaagtttttaagaagaggctgattggtttttttgttatttccttttta
atattacttgctttgatgtccaggcttttttattttcaaatagtacatggtgagcattat
caagcagtttctgaagaaaataggatgagaagagttaatatacctccaccaagaggtgaa
atttttgatagacaaggtactgttctagcaagaaattcaccaggctatacagtatcgttg
atggatgttccagaacaagatgaagatgattttatcgatgaattaagtgaaatccttgat
atagatagagaaacaattgaagcaagaatgacatctcaaagatacaggagatttgaacct
gtacctttaaaatctgatgttgattacgaaacggtgagttatttagaggagaagagaaca
gagtttccgggggttgttatagaggttgcgcctacaaggaattatcctgatggaaaatat
gcttctcatctgttggggtggatgggtgagatctctagagaagagctagaaaatggtatg
agagaagtaggttatagaccgggtgactatattggaaaaagtggaatagaaagtgtcttt
gaaaaatatttacgtggtgaagaaggggttcgtcagattgaagttaataggtttggaagt
attgttacagagatggggcaagaagagccagaaccaggaaatgatttgcaactaacactg
gacttcgagcttcaaaaggatttgaccaagtcgttagatgaagctagatttgaagcaaaa
gaagataaaaaagaagatgcaagacaagatggcttggatcctgactctatcgaagctaaa
ggtgctgccgggatggtcttagatccagactctggtggaattttgtcaatggtaagtact
cctcaatttaacccagagacttttggcaaagattacaatgagcttcaaagcgatccgcta
aatcctgttagaaatagagttcttagagaaaaatatcctcctggttcaacttttaagatg
gtgacagccgttgcagcactagaagaaaacgaaattactggaggagaaacaattcatgac
cagggaaggtactgggaaccaccttaccctaggaactatggaggtatagctcacggtaga
atatcgatggttgaagcaatggccaaatcttctaatgtgtattttgcagaacttggaaat
agattagggatagataaacttagcagctggtcaagagaatttggatttggaaattatgta
ggcctagaggatataagcggtgagttaagtggggatcttgctggccgtgagataaaacag
cagatttatagtgaacctcaacacagtatttggtttcccggggatactttgaacgcagct
ttggggcaggggtatcattcatatactccactgcagatgggcaattatgctgcaatggtt
gctaataaaggtattcattacagaccgtatttggtggacaaaatttatgacgatgatgaa
gtgattgaaaaaagctcacctgagacattaagagagattgaagtaaatgagagaacatgg
gagcttgttagagaaggtatgagagatgcctcgcttcctggaggaacagcaggtcagttg
tctgaagatctcccttttgatgtagctgtcaaaacgggtacagcagaaactggttctgga
agagaacctcacagttggatggtcggttttgcaccgtatgacgatccagagatagccttt
gctttaattgttgaaaacggtggtgttgctggggcaaggctaacccctgtagcaagagat
ttgatagattcgtattttgacttaggtattgatgaagttgagatagaagaagatgctact
ggagagataacctattaa
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