Natranaerofaba carboxydovora: ACONDI_00540
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Entry
ACONDI_00540 CDS
T07970
Symbol
addA_1
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
ncd
Natranaerofaba carboxydovora
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ncd02048
]
ACONDI_00540 (addA_1)
Enzymes [BR:
ncd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
ACONDI_00540 (addA_1)
Prokaryotic defense system [BR:
ncd02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
ACONDI_00540 (addA_1)
Subtype I-B factors
ACONDI_00540 (addA_1)
Subtype I-C factors
ACONDI_00540 (addA_1)
Subtype I-D factors
ACONDI_00540 (addA_1)
Type II CRISPR-Cas system
Subtype II-B factors
ACONDI_00540 (addA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Dna2
DEAD
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-ProteinID:
UMZ72997
LinkDB
All DBs
Position
567574..572130
Genome browser
AA seq
1518 aa
AA seq
DB search
MSKEKEFIDQIPDQPQRDQLNKEFNANFFVEASAGSGKTSCLVDRMVYHAVRLENKEDIS
KIVAITFTKKAAQEFRSRFQEKLEKLLKEGNVDNIDETKIKEILEDDAKREERIHYILDN
LDNIFMGTIHSFCARMLRERPIEAELNIGFKEIDDKENETFMENAWNEFLLTEANKGISK
DLERTGVYPPQLYNLFLQLDNNKDVDFNANFENEAKDLVNDCEDSKELINLIKNEDTHLK
ILQKIFGDFYCHMSLNEETLDKEIVEPDCPEEIKRKTGEAFNKNNRKRIANLAFYYEKYR
CKEEELLENYPQLLEMLENFTKIKLKQSPTEIKVKDKDKKKTLKKKFKERLQEENEKHNV
NKKIAELLKLYYELKCYQNALDFAHRAAQFAQEKRKKESLVSFEDLLFYSRNLLLRSQEA
RDFFQKKYCYFYVDEFQDTDPLQTEILFYLTASEFKENWQEIIPNKGSLFIVGDPKQSIY
RFKRADVINYSLVKQIIEKADGRVINLTTNFRSVDALCKDFNEIFNKLLPKDDSDTQVTY
EEVQSGRSALTSDDKRKEISGIKVLPQIKLPTENQKEHLLKEDPPRVAEFIYNAVESGEF
NLARNRGKGKPETLEPANYGDFMLLTYDKSDMDVYIRELQKLKIPYTLSGESCFSESLGI
RELVKILESIENPYDEVKTVAALRSIFLGVSDEELFEYRTCGKNFILNKDLSDKKNKEER
SNIEDKMVTLEHYNEWAKLYSPVVLMEKIIDDLKVVPYSIYSYTCAEDYDHLKREENGLN
LLYQLLETMRGEEINGNIYNITSLIRRINFWMDENIDNEMPFEIESGLNAVSVMNLHKAK
GLQAPVVILAKPCGKSNISPSVHVERTDDMKVKGYLKIQEKVGDKKFIKNLISVNKWEDK
LKQEKDLLEEEHIRKLYVAATRAENLLVISNADKDIPKSNRPWKEICEKLSEIEKDESED
KELKMREISIPEHSASKSKETEIAEETSSEDLNFLNESIKNNWQNCKEVTYSHRSPSELK
TDYQGSNQSLSKNRLWKDLLNGLHKKLGEEDVKVQMLGTEDEEVNSYPVNETLDDIVEEI
IDTMLDEDVKNSKDFKQMLKAKGLRDESEIPDALLSDYKKGTHSDRRGPLWGTMVHLLLE
RLVDNRKVINEANIEKYIEKAVKETLGETLYESNFRDTKFMNQYIILEKALGFKKKDKTK
PLQNLKEVREILYEQLKDTAKRFINGVYPQAEPNREKLWQRIQNAEEVVTEYDFEIPLYE
TEDKELYDLCIETKEGNEEDGENGDMDENKNNGEMFLFSGSIDLMIKENDSWVIVDYKTN
RVDNPAFLDEMYRNQLKAYRMLWEKVSGEKVSEAAVITYHVKAWDEPNESFTERSSREKE
SYLDYPLEEFAEKLKDKNFVEKISNVTNHGVKLQRLNTFLFLTVVEIFIEKTQGGEKASI
LKEYNVISDYTAKSLGHLQNGVKKAFGYEERDKFENALYEGKDFVEGVNTVEELLDKMIE
MEGEAKIEEEYKKIKEYL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaagaaaaagaatttatagatcaaattcccgatcagccacagagagatcaacta
aataaagaatttaatgctaacttttttgttgaagctagtgcaggttctggtaagactagc
tgtttggtggacagaatggtctatcatgctgtgcggttagaaaacaaagaagatattagt
aaaattgttgccattactttcacaaaaaaagctgctcaggagtttagatccagatttcaa
gaaaaactagagaaacttcttaaagagggtaatgttgataacatagacgaaacaaaaata
aaagaaattcttgaagacgatgctaaaagagaagagcgtatacattacattttagataac
ttagataacatatttatgggaactatccattccttttgtgctagaatgcttcgtgaaaga
ccgatagaagcggaactaaatattggttttaaggagattgatgataaagaaaatgaaact
tttatggaaaatgcctggaatgaatttttattaacagaagcaaataaggggattagcaag
gatttagaaagaacaggtgtatatccaccccagttatataatttgtttttgcaattggat
aataataaagacgttgattttaatgctaattttgaaaatgaggcaaaggatttggtaaat
gactgcgaagattcaaaagaattaataaaccttattaaaaacgaagatactcatttaaaa
attctacaaaaaatatttggagatttttattgtcatatgtctttgaatgaagagacattg
gataaagaaatagttgaacctgattgtccagaagaaataaaaagaaaaactggagaagca
tttaataaaaataatagaaagcgaattgcaaatttagctttttactatgaaaaatataga
tgtaaggaagaagagttgcttgaaaactatcctcaattgttggagatgttagagaatttt
acaaagataaagcttaagcaaagtccaactgaaataaaggtaaaggataaagataaaaag
aaaactctgaagaaaaaatttaaagagcgattgcaagaagaaaatgaaaaacacaatgta
aacaaaaaaattgcagagttgttgaaactatactatgaactaaaatgctatcaaaatgct
ttagattttgcccatagagcggctcaatttgcacaagagaaaagaaaaaaagaatcactt
gttagctttgaggatctattattttattctagaaatttgctgctccgtagccaagaagcg
agagattttttccagaaaaaatactgctatttttacgtagacgaattccaagacactgac
ccattacaaacagagatacttttttatttaacggctagtgaatttaaggaaaactggcaa
gaaattattccaaataaaggttcgttatttatagtaggagatccaaaacagtccatatat
cgtttcaaaagggcagatgtaataaattactcgttagttaaacaaataatagaaaaagct
gatggtcgtgttattaacctaactaccaattttcgttctgtggatgctttgtgtaaagat
tttaatgaaatatttaataaactattgccgaaagatgatagcgatacccaggtgacttac
gaagaagttcaatcgggtagaagtgcgttaacttctgatgataaaagaaaagagatttcg
gggataaaagttttaccacaaataaaactgccgactgaaaaccaaaaagaacatttactt
aaagaagatccccctcgagttgcagagtttatctataatgcagtggagtccggggagttt
aatctagctagaaataggggtaagggtaagccagaaactttagagcctgctaattatgga
gactttatgttgttgacttacgataaaagtgacatggatgtttatattagggaactgcag
aaactaaaaattccatataccttatccggggaaagttgtttttctgaatcactaggtatc
agagaactggttaaaatattagaaagtattgaaaacccttatgatgaagtgaaaacagtt
gctgcattaaggagcatttttttgggagtttcagatgaagaactttttgaatataggact
tgtggcaaaaactttatcttaaacaaagatctttcagataaaaaaaataaagaagaacga
agcaatattgaagataaaatggttaccctagaacattacaatgaatgggcaaaattatat
tctccagtagttttgatggaaaagataatagatgatttaaaggtcgttccttattccata
tattcttatacctgtgcagaggattatgatcacttaaaaagagaagaaaatggtttaaac
ctgttataccagttgttagagacaatgcggggtgaagaaattaatggtaatatttacaac
attacctctttgatacgccgaattaatttttggatggatgaaaatatagataatgaaatg
ccctttgaaattgaatccgggttaaacgctgtaagtgtaatgaatcttcataaagcaaaa
ggcttacaagcacctgtagttatccttgctaaaccttgtggaaaatcaaatattagtccg
agtgttcatgtagaacgcacagatgatatgaaagtaaaaggctacttgaaaatccaagaa
aaagttggagataaaaaattcattaaaaatcttataagtgttaataaatgggaagataaa
cttaaacaagaaaaggatttattagaagaagaacatataagaaaactgtatgttgcagct
acaagggccgaaaacctactagtaattagcaacgcagataaagatataccaaaaagcaat
cgtccctggaaagaaatatgtgaaaaattgagtgagattgaaaaagacgagtctgaagat
aaagaacttaaaatgagagaaataagtattccagaacattcagcttctaaatcaaaagaa
actgaaatagcagaagagactagcagtgaagacttaaatttcttaaatgaatctataaaa
aacaattggcaaaattgcaaagaagttacctatagccatagaagccccagtgaattaaaa
actgattaccaagggtccaatcaatccctatctaaaaataggctttggaaagacctactg
aatggattacacaaaaaactaggggaagaagatgttaaagtgcagatgcttggtacagag
gatgaagaagtgaatagttatcctgttaatgagacattagatgacattgtagaagagata
atagatactatgttagatgaagatgtgaaaaatagcaaggatttcaaacagatgttaaag
gcaaaaggattaagagatgaaagtgaaattccggatgcacttctatcagactataaaaaa
ggtactcacagtgatagacgtgggccactatgggggacaatggttcacctgctgttagaa
aggctggtagacaataggaaggttattaatgaagctaatattgagaaatatatagaaaaa
gcagtaaaggaaactttgggcgagactctttatgaaagtaactttagagatactaaattt
atgaatcaatatataattttagaaaaagctttaggatttaaaaagaaagataaaacaaag
ccgctgcaaaaccttaaagaagttagagaaattttatatgaacaactaaaagatacagcc
aaacggtttataaacggtgtatatccccaggcagaacctaatagggaaaagctttggcaa
agaatacagaatgctgaggaagtggtaactgaatatgatttcgaaataccgttgtatgaa
actgaagataaagaattatatgatctttgtattgagaccaaagaaggtaatgaagaagat
ggtgaaaatggtgacatggatgaaaataaaaacaatggggagatgtttttgttctccggt
tccattgaccttatgataaaggaaaatgatagctgggtgattgtagattataaaactaat
agagtggacaaccctgccttcctagatgaaatgtataggaaccaattgaaagcttacagg
atgctctgggagaaagtcagcggagaaaaggtgagcgaagctgcagttatcacatatcat
gtgaaggcatgggatgaacctaatgagtcatttactgaaagaagcagcagagagaaagaa
agttatttggattacccacttgaagaatttgcggaaaaactaaaagataaaaactttgta
gaaaaaataagcaatgtaactaaccatggggtgaagcttcaaagacttaatactttttta
tttttaacagttgtagaaatatttatagagaaaacacaggggggtgaaaaagcaagcata
cttaaagaatataacgtaataagtgattatactgctaaaagcttaggccatttgcagaat
ggtgtaaagaaagcatttggttatgaagaaagagacaaatttgagaacgcgttatatgag
ggaaaagactttgtagagggagttaatactgtcgaggaattattagataagatgatagaa
atggaaggggaggctaagattgaagaagagtataaaaaaataaaagaatacctttaa
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integrated database retrieval system
