Natranaerofaba carboxydovora: ACONDI_00795
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Entry
ACONDI_00795 CDS
T07970
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03410
Base excision repair
ncd03430
Mismatch repair
ncd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACONDI_00795 (recJ)
03430 Mismatch repair
ACONDI_00795 (recJ)
03440 Homologous recombination
ACONDI_00795 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncd03400
]
ACONDI_00795 (recJ)
DNA repair and recombination proteins [BR:
ncd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACONDI_00795 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACONDI_00795 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACONDI_00795 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ssDNA-exonuc_C
VCIP135_N
Motif
Other DBs
NCBI-ProteinID:
UMZ73242
LinkDB
All DBs
Position
826156..828591
Genome browser
AA seq
811 aa
AA seq
DB search
MQQPGRPYSKWEFSNELLDKTIEMSDKNGYSRILNKLLENRNMLDENEIEKFLNPAWENL
HDPFLLIDLDKGAKRLKQALENKEDVLVYGDYDADGVSATSLLCSFINKNGGKARYLIPD
RFSEGYGLTFDALNRTSEFPDLLITVDCGINSVEEVEWLNENGTDVIITDHHEQLGDLPP
AIAVINPKRKESDYPFKELSGVGVCLKLVWAVLVYQNNSSIREELEFYLDLVALGTIADL
VPLVDENRFFVIRGLKNFGQNRTGLKALTDIAGLNDQNLNVGNIAFVIAPRINAAGRLES
GELAVKLLLEESSYDKAYERADYLSKENDERRELEKKVFEEAREEILKNDYHREDYVIVV
GKEDWHEGVIGIAASKILEEFYQPVVLLTIDGDEAKGSCRSISSFNMVEGLSKCEDLLKK
YGGHKLAAGLTLETCKIDIFREKLNDYAREKLSSNDLIPSINVDISVPACYITDKLVEEI
DLLAPFGIGNPKPVLSSVMKVDHLQRVGKNKEHVKLSLYDGQYNYDGIWFNAVTKLPNVK
KDSYINVAYTPKINNFNQKKSVDLQIVDIKHDECEKIIEDYRNCDKRKVLEKLKEGSTFL
VNTKETEKVLRSNLNKIKNKKENTNIVKFNNLSNTVIKSDTLILFDLPFDGEALRKNLRK
MQIKKIYLLYCNEDKNKNDYLWKASIPTKDKLIWVYNRIFHLNNSSEIDIEEIKKLFIES
SFPGTTWRLINKCLDIFTELDVLKENNNSYMIKRKRKSESLEQIDFNVSKTYKQEKNRLT
KINWWEDKFLNSPAALIYQIFFDDMSLDLLT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaaccaggaagaccttattccaaatgggaatttagcaatgaattattggataaa
accatagaaatgtcagacaaaaatggttattctagaattcttaataaattactggaaaat
agaaatatgcttgatgaaaacgaaatagaaaaatttttgaatcctgcctgggaaaacctc
catgatccttttttattaatagatcttgacaaaggggcaaaaaggttaaagcaggcacta
gaaaataaagaagatgttctggtttatggagattatgacgcagatggtgtgagtgccacg
tctttactatgtagttttataaataaaaatggtggtaaggcacgttatttgattccagat
agattttctgaagggtacgggctcacctttgatgccctgaatagaaccagtgaatttcca
gatttattaataacggttgattgtggcataaattctgtagaagaagttgagtggttaaat
gaaaatggtactgatgttataataacagatcatcacgagcaacttggcgatctacctccg
gctattgcagttattaatcccaaaagaaaagaatcagactacccttttaaagaacttagt
ggagtcggtgtttgtttaaaactggtctgggctgtgctggtttatcaaaataattcttct
ataagggaagaactagaattttaccttgatcttgtagcccttggtaccatagcagacctc
gtccccctggttgacgaaaacaggttttttgttattagaggcttgaaaaactttggacaa
aatagaacaggccttaaagctctaacagatatagcggggctcaatgatcaaaaccttaat
gtagggaatattgcctttgtaattgcgcctagaataaatgctgcgggaagacttgagagc
ggggaactggctgttaaacttttgttagaggaatcatcttatgataaggcttatgaaaga
gcagattatttatctaaagaaaatgatgaaaggcgggagttagagaaaaaagtctttgaa
gaagcaagggaagaaatacttaaaaatgactatcatagagaagactatgtaattgtagtt
ggcaaagaggattggcatgaaggtgttattgggatagccgcttcaaaaatattggaagaa
ttttatcaacctgttgttttacttactatagacggtgatgaagctaaaggttcttgtcgt
agtatatcttcgtttaatatggttgaaggactttctaaatgtgaggatttattaaaaaag
tatggaggacataagcttgcggcaggtcttactttagaaacttgcaaaattgacattttt
agagaaaagttaaatgattacgcaagagagaaactctctagcaatgacttgataccttcg
ataaatgtagacatctctgttcctgcgtgttatattactgacaaactagttgaagagata
gatctgcttgcgccctttggaataggaaatccaaagccggtgttaagttctgttatgaaa
gttgatcatttacaaagagtcggtaaaaacaaagagcatgttaaactttctctatatgat
ggacagtacaactatgatgggatatggtttaatgctgtaacaaaacttcctaatgttaaa
aaagattcttatataaatgttgcttatacccccaaaattaataatttcaatcaaaaaaaa
tcagtagacttacaaattgtagacataaagcatgatgaatgtgaaaaaattattgaagac
tatagaaactgtgataaaagaaaagttttagagaagttaaaagaagggtcaacatttctt
gtgaacacgaaagagactgagaaagtattaagaagcaaccttaataaaattaaaaataaa
aaggaaaataccaatattgtgaagtttaataatttgtctaatacagttattaaatcagat
accttaattttatttgatcttccatttgatggggaagctttgagaaaaaatttgagaaaa
atgcagattaaaaaaatatatttgctgtactgcaatgaagataagaacaaaaatgattat
ttatggaaggcttctattccgacaaaggataaacttatttgggtatacaacagaattttt
cacttaaacaatagtagtgaaatagacatagaagaaataaaaaaattatttatcgaaagc
tcatttccaggtactacctggaggctcattaataagtgtttagatattttcacagaactt
gatgttttaaaagaaaataataattcttatatgataaaaagaaaaagaaaaagtgaaagt
ctagaacaaattgattttaatgtgtcaaagacgtataaacaagaaaaaaataggcttaca
aagataaattggtgggaagacaaatttttgaactcacctgctgctttaatataccaaata
ttttttgatgacatgagtttagacttacttacttag
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