Natranaerofaba carboxydovora: ACONDI_00967
Help
Entry
ACONDI_00967 CDS
T07970
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ncd
Natranaerofaba carboxydovora
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncd03016
]
ACONDI_00967 (truB)
Enzymes [BR:
ncd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACONDI_00967 (truB)
Transfer RNA biogenesis [BR:
ncd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACONDI_00967 (truB)
Prokaryotic type
ACONDI_00967 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UMZ73413
LinkDB
All DBs
Position
997390..998280
Genome browser
AA seq
296 aa
AA seq
DB search
MKGILNLLKPPGSTSHDMVDQVRKKLQIKKIGHTGTLDPGACGVLPLIIGKATKISDYII
SQDKEYIFELTLGVSTDTLDGEGNILEEVPVTEKNEKQLLDGYQKLIGSMKQVPPMYSAI
KRGGKKLYELARNGETVNREPRDVSIYDLQLKHTYLHKNKKRFLFKVNCSKGTYIRVLAE
DLAKIAGTIGYMSFLLRTKAGNFTIDNAIRYEEFIDARDEDLYNYIVTMDKALVEFPRVK
LNEKKSRFFRSGNAVDISIPDTIEPSLYRIYDENEEFLGLGREISHGKLKPEKVLV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagggatattaaatcttttaaaacccccggggtcaacttctcatgacatggtagac
caggtgagaaaaaaattacagattaaaaaaattggacatacagggacattagacccagga
gcctgtggggttcttccccttattattggcaaggcaacaaaaattagtgattatattatt
agccaggataaagaatatattttcgaattaacccttggggttagtaccgatactctagat
ggtgagggaaatatactagaagaagtaccagttacagaaaagaatgaaaaacagctcctt
gatgggtaccaaaaattaatcggatcaatgaaacaagtacctccaatgtattctgcaatc
aaaagaggtggcaaaaaactatatgaacttgctagaaatggcgaaaccgtaaaccgagaa
cccagagatgtaagtatatatgatctacagttaaaacatacttatttacataaaaataag
aaaaggtttttatttaaagtgaactgctctaaaggtacatatattagagttttggctgag
gacttagctaaaatagctggaactattggatatatgtcttttctactgcgcacaaaggca
ggcaactttaccatagataatgctataagatatgaagaatttattgatgcaagagatgaa
gacttgtacaattatattgttactatggacaaggctttagttgaatttccaagggttaaa
ttaaatgaaaagaaaagtaggttttttagatcaggaaatgcagttgatataagtatacca
gatactattgaaccttctttatatagaatttatgatgaaaatgaagaattcctgggactt
ggtagggaaatctcacatggaaaattaaaaccagaaaaagtgctagtttag
DBGET
integrated database retrieval system
