Natranaerofaba carboxydovora: ACONDI_00970
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Entry
ACONDI_00970 CDS
T07970
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACONDI_00970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncd03019
]
ACONDI_00970 (pnp)
03016 Transfer RNA biogenesis [BR:
ncd03016
]
ACONDI_00970 (pnp)
Enzymes [BR:
ncd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACONDI_00970 (pnp)
Messenger RNA biogenesis [BR:
ncd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACONDI_00970 (pnp)
Transfer RNA biogenesis [BR:
ncd03016
]
Prokaryotic type
tRNA degradation factors
ACONDI_00970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
RNA_pol_Rpc82
Motif
Other DBs
NCBI-ProteinID:
UMZ73416
LinkDB
All DBs
Position
999761..1001902
Genome browser
AA seq
713 aa
AA seq
DB search
MPEYSMELNGRKLLLETGKFAKQANGAVTVRYGNTVVLVTATASDEPREGIDFFPLTVDY
EERLYAVGKIPGGFIKREGRPTDKATLAARLTDRPLRPLFPDGFRNAVHIVVTVLSVDQD
CSPEIAGIIGASAALTISDIPFHGPIAAVNVGKDENGLVINPPYDEEEEHDLDLVVAGTK
DAIMMVEAGANEIPKNEMIEAIMTGHEAIKKIIELQVEMAKDNAVEKMEVYLEQPEEELV
NKINEFCLDRIKESLNIVDKKERETAVDKVKDEVMEHFIEEDSPSEHSNKVKMAFEKILK
NEMRRMIIQENLRVDGRRQDEIREISCEVDLLPNTHGSGLFTRGQTQVLDVCTLGALGDM
QMLDGLDLEESKRYMHHYNFPPFSVGEAGFMRGPSRREIGHGFLAERAVYPMIPSQENFP
YTIRLVSEVLESNGSTSMGSVCASSLSLMDAGVPIKRPVSGIAMGLIKEDDEIAILSDIQ
GIEDFLGDMDFKVAGTEEGITALQMDIKIEGITREILEQAINRGREGYLYILEEMKKVIA
APRDQLSPQAPRVITKQISPDKIRDVIGPGGKMINKIIDETGVKIDIEPDGKVYISSDDA
ESAEKALKTIDQLTKEAKPGDIFLGKVKRTENYGAFVEILPGKEGLIHISKLAEERVNKT
EDIVKVGDEVLVKVLNIDDKGRINLSRKDAIEEKDKDIDKDKSKEKAKFKNKS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatatagtatggaattgaatggtagaaaacttctgttagaaacaggaaagttt
gccaaacaggctaatggggctgtaactgttagatatggaaatacagtagtacttgttact
gctacagcttctgatgaaccacgagagggaatagattttttcccattgacagtagattat
gaagaaaggctttatgctgtgggaaagattccgggaggattcatcaagcgcgaaggtaga
cctacagataaagcaactttggcagcaagattaacagatcgtcctttaaggcctcttttt
ccagatggttttaggaatgcggttcatatagttgttactgtacttagcgtagaccaggac
tgctcgccagaaattgctggtatcataggggcctctgcagccttaacgatatctgacata
ccatttcatggacctattgctgcagtaaatgtaggaaaagatgaaaatggacttgtgata
aacccaccatatgatgaagaggaagaacatgacctagacctggttgttgcagggactaaa
gatgccataatgatggttgaagctggtgctaatgaaatcccgaagaatgagatgatagaa
gctataatgacaggccatgaagccataaaaaaaataattgaacttcaagtagagatggct
aaagataacgcagtagaaaagatggaagtttatttagaacaaccagaggaagagctggtt
aacaaaattaacgagttttgtttggataggataaaagaatccttaaatatagtagacaaa
aaagaaagagaaacagctgtagataaggttaaagacgaagtaatggagcattttatagaa
gaagattctccttctgaacatagcaacaaggttaaaatggcttttgaaaagattttaaag
aacgagatgcgaagaatgatcattcaggagaacttgagagtagatggaagacgccaggat
gagataagagagatttcgtgtgaagttgacttattacctaacacccatggatcaggactt
ttcacccgtgggcaaacccaggtactagatgtttgtacactaggagcattaggtgatatg
cagatgctagatgggcttgacttggaagagtctaagagatatatgcatcactataacttt
ccgccctttagtgtaggcgaagcaggctttatgcgcggccctagtagaagagaaattggg
catggatttttggctgagagagctgtgtatccaatgatcccatctcaggaaaacttccct
tatacaataaggttagttagtgaagtgttagaatctaatggatcaacatctatgggaagt
gtatgtgcaagctcattatcgcttatggatgcaggggttcctatcaagagacctgtatca
ggaattgcaatgggtttaatcaaagaagatgatgagatagctattttgagtgatattcag
gggattgaagactttttaggagatatggactttaaggttgctggtacagaagaaggcatt
accgctcttcagatggatatcaagattgaaggtattaccagagaaatattagaacaggcg
ataaatcgtggcagagaaggttatctttacatccttgaagaaatgaaaaaggttatagcg
gcgccaagagatcaactatctcctcaagcacctagagttataacaaagcagatctcacct
gacaaaataagagacgtaattggtccgggtggaaaaatgattaataagattatagatgaa
acaggtgtaaaaatcgatatagaacctgatggtaaggtttatatctcgtctgatgatgct
gaaagtgctgagaaggcacttaaaacaattgatcagctaactaaagaagcaaagccagga
gatatcttcttaggcaaggttaaaagaactgaaaattacggagccttcgtagaaatatta
ccaggtaaagaagggttaattcacatttcaaaactggctgaagaaagagtaaataaaact
gaagatatagtaaaagtaggagatgaagttttggtcaaagtgcttaatattgatgataaa
ggtagaataaatctttctagaaaagatgcgattgaagaaaaggataaagatattgacaaa
gataaaagtaaagaaaaagcaaagtttaaaaataagagttag
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