Natranaerofaba carboxydovora: ACONDI_01025
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Entry
ACONDI_01025 CDS
T07970
Symbol
rimO_1
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ncd
Natranaerofaba carboxydovora
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncd03009
]
ACONDI_01025 (rimO_1)
Enzymes [BR:
ncd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACONDI_01025 (rimO_1)
Ribosome biogenesis [BR:
ncd03009
]
Prokaryotic type
ribosomal protein modification factors
ACONDI_01025 (rimO_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
MoCF_biosynth
Adhesin_Dr
Motif
Other DBs
NCBI-ProteinID:
UMZ73471
LinkDB
All DBs
Position
1059001..1060362
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AA seq
453 aa
AA seq
DB search
MLVLKKVGLISLGCAKNQVDSEVMLGHLKSHNYQLTEDNYQADALIVNTCGFIEDAKEES
IEAILKASRYKEVGECDVIIVCGCLSQRYESMLKEEMPEIDVLLGTDQWDKIGETLDKFF
AGKEVKDDFSRKTDMYSHDDPRLSIDYSDYRGSAYIKIAEGCDNHCSFCAIPSIRGGFRS
RSIDSIKKEATKLASVGVREINLIAQDTTRYGLDIYDEYKLSELLEELTTIPEITWIRFL
YGHPSRIDDKLINTVSAKNKICPYVDLPLQHINEKVLKRMNRGGSKPEIKQLLQKLRANI
PDIVIRTSFMVGFPGETEEEFNELLDFIQEMKFDQAGIFKYSKEENTKAYEYKDEVDEEE
KEKRYIEATKLQQEIMKEKRSKWIGKTFKVLIDEELEDEPGTYLGRTKYQAPEVDGSVII
SDSNLDEGNFVSVKITQILENDLIGEIDYEFSK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgctagtactgaaaaaagtaggacttatttcacttggatgtgccaaaaatcaagttgat
tctgaagtaatgcttggacacttaaaatcccataactatcaactaacagaagataattat
caagcagatgctttaatagtaaatacctgcgggttcattgaagatgctaaagaggaatct
atagaagctattttaaaagcttctaggtacaaagaagttggggaatgtgatgtaataata
gtatgtggctgtttatcccagcgatacgaaagtatgctaaaagaagaaatgcctgagata
gatgttttgctgggtactgaccaatgggacaaaataggcgaaactttagataaatttttt
gccgggaaagaagttaaggatgactttagtagaaagactgatatgtattcccacgatgat
ccaagactctctattgattactccgattatagaggaagtgcatatataaaaatagctgaa
ggttgtgacaatcactgttctttttgtgcaattccttcaatcaggggcggatttagaagt
aggagtatagattcaataaaaaaagaagcaacaaaactggcaagcgtcggggttagagag
ataaatctgatagctcaggacactacaagatatggtctggatatatatgatgaatataaa
ttaagcgaacttttagaagaattgacaactatacctgagataacctggattagatttttg
tatggacatccttcaaggattgatgataaactaataaacacagtttcagcgaagaataag
atctgtccatatgtagatttaccacttcaacatataaatgaaaaagttttaaaaaggatg
aaccggggcggttctaaacctgaaatcaaacaactcttacaaaagctaagagctaatata
cctgatattgttattaggacttctttcatggtaggttttccaggtgaaaccgaagaggaa
tttaatgaactgttagattttatacaagaaatgaaatttgatcaagcagggatttttaaa
tattcaaaagaagaaaatacaaaggcttatgaatataaagatgaagttgatgaagaagaa
aaagaaaaaagatacatagaagcaaccaaattacaacaggagataatgaaggagaaaaga
agtaaatggattggcaaaacatttaaggtgttgatagatgaagaactagaagatgagcca
ggaacatatcttggaaggactaagtatcaggctcctgaagttgatgggagtgttataatt
tcagatagcaacttagatgaaggaaactttgtaagtgtaaagataactcaaattttagaa
aatgatttaattggagaaatagactatgaatttagcaaataa
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