KEGG   Natranaerofaba carboxydovora: ACONDI_01094
Entry
ACONDI_01094      CDS       T07970                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ncd  Natranaerofaba carboxydovora
Brite
KEGG Orthology (KO) [BR:ncd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ncd02048]
    ACONDI_01094 (ygcB)
Enzymes [BR:ncd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACONDI_01094 (ygcB)
Prokaryotic defense system [BR:ncd02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    ACONDI_01094 (ygcB)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD HD EDS1_EP DUF498
Other DBs
NCBI-ProteinID: UMZ73540
LinkDB
Position
complement(1140330..1142456)
AA seq 708 aa
MLAKKNPTKSILEHSEEAKEKAKELKEILINFSIFNNRLFELLEIAAFYHDIGKANQKFQ
ERITKNIKRMFEDEVPHNLLSACMLKSDLGLNKDEEKSVVLAIAFHHNVSTDKANNAKLK
DNLKELENNKEYLVKKMGIDFDIRKENIRKLSSKAKHINSLKSLQQFILLKGFLHRVDYA
ASSGLEIESGWEESIYDAVNEYMECHDFKKNKLQEFAENNCDNNIISIAQTGMGKTESAL
LWAGNYKLFFTLPIRVSSNAIFHRAKEMGIKSAGLIHSTSLDFLEYYGDDFTKVYDESRL
LAKKLTVSTIDQIMKFPMLYPGFERDLTTLAYSKVVIDEIQAYDPDVAALLIKGLELINK
MGGNFYVMTATLPAIYKEELEKRIPNMKIDKFVDEPPMLRHRVQIENDSILNADEEIRKA
SIDKKILVIVNTVDTAIKLYNKLKEEGANLLHSRFTMEHRSELESKIIKFSGQNQNGIWI
TTQIVEASLDIDFDFLFTEASPLDSLFQRLGRCYRRRPIEDDKINVKVFTNHISGYGTVY
DKFLINKSIELLDGMSDLEETIKIDLVDKLYSVETLKQQEKTKFLTQFNETLRWLDDLYE
NIYKEEMSKREAQTRLRKLKTINIIPEYLTKEVQSLIKDLKTTSDENNKRDLKRTINMKT
VSIQDFSTDYKQDKRLINKELIDEDLNLFRLPSSKYYYYEQDKSGLIL
NT seq 2127 nt   +upstreamnt  +downstreamnt
ttgctagcaaagaaaaatccgactaaaagcatattagaacactcagaagaagcaaaagaa
aaagcaaaagaattaaaagaaatactaatcaatttctctatttttaataacagattattc
gaactacttgaaattgctgctttttatcatgatataggtaaagccaatcaaaaatttcaa
gaacgcatcactaaaaatataaagagaatgtttgaagatgaggtaccacacaatcttttg
tcagcttgcatgttaaaaagtgatttaggacttaataaagatgaagaaaaatctgtggtg
ctagctatcgcttttcaccataatgtttcaacagataaagctaataatgcaaaattaaaa
gataacctaaaagagttagaaaataataaagaatatttagtaaaaaaaatgggaattgac
tttgatataagaaaagaaaatataagaaagttaagttcaaaagcaaaacatataaattca
ttaaagagtttacagcaatttatattattaaaaggttttttacatagggtcgattatgca
gcatcttcaggtttagaaattgaaagtgggtgggaagagtcaatttatgatgctgttaat
gaatatatggaatgccatgatttcaaaaagaacaaactgcaagaattcgcagaaaataat
tgcgataataatataatctccattgctcaaacaggcatggggaaaactgaatctgcttta
ttatgggctggaaattacaagttgttctttacattacctatacgagttagttctaatgcg
atatttcatagagctaaagaaatgggtataaagtcagcaggattaatacattcaactagc
ctggactttttagaatactatggagatgattttactaaagtttatgatgagtcaagattg
ttagctaaaaaactaacagtttcaactattgatcaaataatgaagtttcctatgctttat
cctggttttgaaagagatttaacaacactagcttattctaaagttgtaatcgatgaaatt
caagcctatgatcctgatgtagcagcccttttaattaaaggacttgaacttatcaataaa
atgggaggtaatttttatgtaatgacagcaactttacctgctatatataaagaagagcta
gaaaagagaatcccaaatatgaaaattgacaaatttgttgatgaacctccaatgctaaga
caccgtgttcaaatcgaaaatgattcaattttaaatgctgatgaagaaattagaaaagcc
tcaatagataaaaagatattagtaattgttaatacagtcgatacagctataaaattatac
aataaattaaaggaagaaggagccaatttattacattcacgctttaccatggaacataga
agtgaacttgaaagtaaaatcataaaattctcaggtcaaaatcaaaatggaatatggatc
acaactcaaattgtagaagctagcttggacatagattttgattttctatttaccgaagct
tcacctttagatagtttgtttcaacgattaggtcgttgctataggcgtcgaccaattgaa
gatgataaaattaatgtcaaagtttttacgaatcatatctctggctatggaactgtatat
gacaaatttttaataaataaaagtattgaattattagacggcatgtctgatttagaagaa
actattaaaatagacttagttgataaactctactctgtagaaaccctaaaacaacaagaa
aaaacaaaatttctaacccaatttaatgaaacacttagatggttggatgatttatatgaa
aatatttataaagaagaaatgtcaaaaagagaggcccaaacgagactccgtaaacttaaa
actataaatattatcccagaataccttactaaagaagtacaatcattaataaaagattta
aagacaacttcagatgaaaacaacaaacgagatttaaaaagaactataaacatgaaaact
gttagcatccaagattttagtacagattacaaacaagataagaggcttatcaataaagaa
cttattgacgaagatctaaacctttttagacttccaagttctaaatattactattacgag
caagacaaaagtggtttgattttatag

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