Natranaerofaba carboxydovora: ACONDI_01113
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Entry
ACONDI_01113 CDS
T07970
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ncd
Natranaerofaba carboxydovora
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncd03019
]
ACONDI_01113 (yhaM_1)
Messenger RNA biogenesis [BR:
ncd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACONDI_01113 (yhaM_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
SpoIVA_C
Motif
Other DBs
NCBI-ProteinID:
UMZ73559
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All DBs
Position
1165715..1166740
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AA seq
341 aa
AA seq
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MTANCLLDLKEPGQTFEGYALVIDVQAATAKNNKPYINLVLGKKEKKLRSKLWDNNFNGY
ELQELVNEVFIQGTIVYIKGDVGKFNEELQLSINKFSRVESDEIEYSDFIPLAPEPKDKL
VKEFENFLEDIENPIIKRVCQNIYNDYNEKFTSYPAAKFNHHAFGSGLLYHTVSMLRMAK
HIATQYTNINRDLLYAGVALHDFGKVYALSEGPVSDYTRSGNLLGHITLTNMLIYKTVEK
IKKERKKVNRKTDLTKKERQLVSELMHIISAHHGKLEYGSPVKPQTLEAEIVHHIDMIDT
RINMINMGLIDDDISKDQAKKIPPLGYFYKSSDNSAESNLE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccaattgtttattagatcttaaagaaccaggacaaacttttgaaggatatgcc
ttagtaatagatgttcaggctgcaactgctaaaaataataaaccttatattaatctagtg
ttagggaaaaaagaaaaaaaactaagaagtaaactctgggataataattttaacggatat
gaattacaggaacttgtaaatgaggttttcattcaaggcactatagtttacataaaaggt
gatgttggcaaattcaacgaagagcttcagttatctatcaataaatttagccgggttgaa
agtgatgaaatagaatattcagactttattccattagctcctgaacccaaagataaactt
gtaaaagaatttgaaaattttctagaagatattgaaaatcctatcatcaaaagagtttgt
caaaatatttacaatgattataatgaaaaattcacctcttacccagctgcaaaatttaac
catcatgcttttggtagtggtttattgtatcatacagtatctatgttgcgaatggctaaa
cacatagcaacacagtacacaaatataaatagggatttactctatgcaggtgtagcttta
catgattttggaaaagtgtacgcactgtctgaggggccagtttctgactatactaggtca
ggtaatttactggggcacattaccctaactaatatgcttatttataaaacagtagaaaaa
ataaaaaaagaaagaaaaaaggtaaacagaaagactgatcttacaaaaaaagagcgtcag
ttagtatctgaactaatgcacattatttctgcgcaccatgggaagttagagtatggcagc
ccagttaagccacaaacgctagaagctgaaatagttcatcatattgatatgattgatacg
agaatcaatatgattaacatgggattaattgatgatgatatatcgaaagatcaagccaaa
aaaatacctcctttagggtacttctataaatcaagcgacaactcggccgaaagcaatttg
gagtga
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