Natranaerofaba carboxydovora: ACONDI_01370
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Entry
ACONDI_01370 CDS
T07970
Symbol
icaR
Name
(GenBank) Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR
Organism
ncd
Natranaerofaba carboxydovora
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
Sigma70_r4
Sigma70_r4_2
HAD_2
GerE
HTH_40
HTH_10
HTH_Tnp_1_2
HTH_24
Sigma70_ECF
HTH_23
HTH_17
HTH_29
HTH_20
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UMZ73801
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Position
complement(1445163..1445780)
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AA seq
205 aa
AA seq
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MNETNTKKSIIESARTLFARRGFKGATTAEIAKSAGISEGTIYRHFENKEELMMECVKPI
FENMIDIAEHKIFTEAYNLRDIMYKGLELRLNLFVENYDTFRIIFNELPYSDKMKNQYMD
FLLTNEGKLTKLIGDMKSMGEIKRSRNFLIFALGQFLALWMYTNFKDWSNKKEVKFSDEM
LNISKEHILDDLTDFFMYGIAGNKD
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgagacaaatacaaaaaaaagtattatagaatctgcaaggactctattcgctagg
agaggttttaaaggtgcaacaacggctgaaattgctaaatctgctggaatatctgaagga
acaatttatagacattttgaaaacaaagaagaactgatgatggagtgtgttaaaccaatt
tttgaaaatatgatagatattgctgaacacaaaatttttactgaagcctataacctacgg
gatataatgtataaaggcttagaattaaggctaaatctttttgtcgaaaattatgatact
tttcgaattatttttaatgaactaccctattcagataagatgaagaatcagtatatggac
tttcttttaacgaacgaaggaaaattaacaaagttaattggggatatgaagagtatggga
gagattaaacgttcaagaaattttctgatatttgctctgggtcaatttttagctttatgg
atgtatactaattttaaagattggtctaacaagaaagaagtcaaattttctgatgagatg
ctaaatatttcaaaagaacatattttggatgatttgacggacttttttatgtatgggata
gcaggaaacaaagattaa
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