Natranaerofaba carboxydovora: ACONDI_01492
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Entry
ACONDI_01492 CDS
T07970
Symbol
dacF_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd00550
Peptidoglycan biosynthesis
ncd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACONDI_01492 (dacF_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncd01002
]
ACONDI_01492 (dacF_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncd01011
]
ACONDI_01492 (dacF_2)
Enzymes [BR:
ncd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACONDI_01492 (dacF_2)
Peptidases and inhibitors [BR:
ncd01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ACONDI_01492 (dacF_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
ncd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ACONDI_01492 (dacF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
UMZ73922
LinkDB
All DBs
Position
complement(1575938..1577191)
Genome browser
AA seq
417 aa
AA seq
DB search
MSKTVSCLFLAVILVLASFSTANAEFDIDGLLEILIEDEVDNENDSREDTDEEVDEFEEF
ESPVLLLGEPGSKEVLVEREIDKKVYPASITKIMTLLVAMEHIEEGKASFEDEVVISKNA
EGVVGTTLFLEKGKTLTLKDLLKGIAVGSANDASIAVAEYISGSVSGFVEEMNRKAKELG
MDNTNFKNPHGLHHDDHYTSARDIFKMSTELVKYGQVLDWFRIWLDESFLEGVIDEEGVY
LSNTNKLIDWYPNCDGLKTGFTDEAGYGISATAKRDDRRFISIVLESENSEERFDEAADL
LDYGFSNYEVENIYPAGDVLKEVPVNKGDKQNVNAVAADNLSVIYERGDDVDVDVEIELD
SEILDAPIEKGQKIGKAYFDHSNKRTEVDLIAEQEISRGTYSDFFGRIIENWVKFGD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaacagtctcctgtttattcttagcagtaatattagttttagctagtttttca
acggctaatgcggagtttgatattgatgggctgttagaaattttgatagaagatgaagta
gacaatgaaaatgatagtagggaagatactgatgaagaagtagatgagtttgaagaattt
gagtcaccagtattactattaggagaaccaggttccaaagaagtgcttgttgaacgtgaa
attgataaaaaagtttatcctgcaagcattacaaagattatgaccttacttgttgctatg
gagcatatcgaagagggtaaggcttcttttgaagatgaagtggttataagtaagaatgcc
gaaggtgttgtagggacgacgttatttttagaaaaagggaaaactttaacccttaaagat
ttgttaaaaggtattgcagttgggtcagcaaatgatgcaagcatagcagtagccgaatat
atttcaggatctgtctcgggttttgtagaagagatgaatcgaaaagcaaaagaattagga
atggacaatactaattttaaaaatcctcatggccttcaccatgatgaccactatacttca
gctagagatatttttaaaatgtcaacagagttagttaaatatggacaggtgctagactgg
tttcggatatggctagatgaaagctttttggaaggtgtaatagatgaagagggtgtttat
ctaagtaacacgaataaacttatagattggtatcctaattgtgacggtctaaaaactgga
tttacagacgaagcgggctatgggatttctgctactgccaaaagagatgatagaagattt
atatctatagttttagaaagcgaaaattcagaagaaagatttgatgaagcggcagattta
cttgactatggtttttctaactatgaagttgaaaatatttacccagctggagatgtgctt
aaagaagtccctgttaacaaaggtgacaaacaaaacgtaaatgctgttgcagcggataat
ctttcggtgatttatgaaagaggagacgatgttgacgttgatgtagagattgaattagat
agtgaaatattagatgcacctattgagaaaggtcaaaaaattggaaaagcatattttgat
catagcaataaaagaacggaagtagacctaatagctgagcaagagatctcaagaggaaca
tacagtgacttctttggtaggataattgagaattgggtgaaatttggagattaa
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