Natranaerofaba carboxydovora: ACONDI_02128
Help
Entry
ACONDI_02128 CDS
T07970
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03420
Nucleotide excision repair
ncd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACONDI_02128 (pcrA)
03430 Mismatch repair
ACONDI_02128 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncd03400
]
ACONDI_02128 (pcrA)
Enzymes [BR:
ncd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACONDI_02128 (pcrA)
DNA repair and recombination proteins [BR:
ncd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACONDI_02128 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ACONDI_02128 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DUF1978
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UMZ74534
LinkDB
All DBs
Position
complement(2230397..2232679)
Genome browser
AA seq
760 aa
AA seq
DB search
MLNEAQREAVCHGEGPLLILAGAGSGKTRVLTHRIAYLIEDAGVHPESILALTFTNKAAN
EMKERVGNLVKTAPPSWVSTFHSACVRILRKDIHHLGYDNNFLIYDTKDKNALVKECINE
INLDSTKYKPAVVSNHISRVKNEPLDSGETNYGDNPSYFYENVERIKEIYQEKLKKNNAL
DFDDLLLFTLKLFEDNQDVLEYYQNKFGHILVDEFQDTNQIQYELIKKLASPENNLFVVG
DDDQSIYLFRGADVRNILYFERDYGSCKVIKLEKNYRSTTNILDAANKVACNNPNRKPKK
LYTDNGEGEKIKYFCGENEYEEARFIAREISESLNNYSKIAILYRTNAQSRAIEEALLKE
NIRHKVVGTSFYDRKEVRDILAYLMVIENPGADLQLERVINEPKRGIGKSTIEKVKNHAE
ENGISFFDALLECDQIGLGNKAVKSIKEFTEMISNFRKMREYLTIKELLQEVAETSGYIQ
ALQKQDTREAEDRIENIKELYSTAADFDVEYGGTLHEFLTNLSLVTDLDKLDEEEDQDNN
DGVVLMTLHSAKGLEFPVVFLTGMEEEIFPHFRALENETEMEEERRICYVGITRAENLLY
LTRANRRTLYGRNRPFLPSRFLNEIDENLIEDLSNESESIANENSFIKGFSYGSNSFNSF
NDSSFKNNKSKSYNNSKTDSSSNLKSPKPPSFNTSNTPQTPKQQSGESYKEGEILKHKKW
GEGEVLKAQEIGGDWVLTVKFENEGIKKLAAGLAPIEKIK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaatgaagctcaaagagaagctgtatgtcacggggaaggtcctcttctaatattg
gcaggggcaggtagtgggaaaactagggtattaacccataggatagcctatcttattgaa
gatgcgggtgttcatccagagagtatccttgcgcttacttttaccaacaaagctgcaaac
gaaatgaaagagcgtgtaggaaaccttgtgaaaacagctccaccaagctgggtgtcaact
tttcactctgcttgtgttaggatactaagaaaagatatacaccatttagggtatgataac
aattttttgatatatgatactaaggataaaaatgctcttgttaaagagtgtattaatgaa
ataaatttagatagtacaaagtacaagcctgccgtggtttctaaccatattagcagagtg
aaaaatgaacctttggattctggcgaaacaaattatggagataacccaagctatttttat
gagaatgtagagaggattaaagaaatataccaggagaagttaaagaaaaataatgctctt
gattttgatgatttattattatttacactcaaattatttgaggataatcaggatgtattg
gagtattatcaaaataaatttggccatattttggtggacgaatttcaggatacaaatcag
attcaatatgaattgataaaaaaacttgcttccccggaaaataatctattcgtagttgga
gatgatgatcagtcgatttatttattcaggggagctgatgtaagaaatatattatatttt
gaaagggactatggttcgtgtaaggtgattaagctagaaaaaaattaccgttcaactaca
aatatacttgatgcggccaacaaagttgcctgcaataatccaaatagaaaacccaaaaaa
ctgtatacagataatggtgaaggcgaaaagataaaatatttttgtggtgagaatgaatat
gaagaagctagatttattgcccgggaaatcagtgaaagcctaaataactactcgaaaatt
gccatattataccgtacaaatgcccagtcaagagcaatagaagaggctttgttaaaggaa
aatattaggcataaagttgtagggacaagtttttatgatcgtaaggaagtaagagatatc
ctggcttatctgatggtaatagaaaatccaggtgcagatctgcagttagagagggttatt
aatgaaccaaaacgtgggattggtaagagtactatagaaaaggtgaaaaatcatgcagaa
gaaaatgggatttccttttttgatgcattgttagagtgtgatcagataggtcttgggaat
aaagcagtaaaatcaatcaaagaatttactgaaatgattagtaattttagaaaaatgagg
gaatacttaacgataaaagaactgctgcaggaggtagctgagacaagcggctatatccag
gccttacaaaagcaagacaccagggaagcagaggacaggatagagaacatcaaagaactc
tattcaacggctgcggattttgacgtggaatatggtgggactttgcatgagtttttgact
aacttatctcttgtaactgatttggacaaattagatgaagaagaagatcaggataataac
gatggagttgttctgatgactctacacagtgccaaaggtctagaatttcctgtagtgttt
ttgactggtatggaagaggagatctttcctcactttagagctttagaaaatgaaacagag
atggaagaggaaaggcgaatttgctatgtagggataaccagggcagaaaatctattatat
ctaacaagagcaaatagaaggactctatatggaagaaataggcctttcttgccttcaaga
tttttgaatgaaatagacgaaaatttgatagaagatctatccaatgagtcggaatctatt
gcaaatgaaaattcatttattaaagggttttcttatgggtctaactcctttaattctttt
aatgatagttcttttaagaataataaatctaaatcctataataacagcaaaactgacagc
tcttcaaatctaaaaagtccaaagcctccttcttttaacacttctaatacaccgcaaacg
cctaaacaacaaagtggcgaaagttataaagaaggtgagattttaaaacacaaaaaatgg
ggcgaaggagaagttcttaaagcacaggaaattggtggagattgggtgcttactgtcaaa
ttcgaaaacgaagggatcaaaaagctagctgctggtcttgccccgattgaaaagatcaaa
tag
DBGET
integrated database retrieval system
