Natranaerofaba carboxydovora: ACONDI_02144
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Entry
ACONDI_02144 CDS
T07970
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACONDI_02144 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncd03019
]
ACONDI_02144 (groL)
03110 Chaperones and folding catalysts [BR:
ncd03110
]
ACONDI_02144 (groL)
03029 Mitochondrial biogenesis [BR:
ncd03029
]
ACONDI_02144 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncd04147
]
ACONDI_02144 (groL)
Enzymes [BR:
ncd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACONDI_02144 (groL)
Messenger RNA biogenesis [BR:
ncd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACONDI_02144 (groL)
Chaperones and folding catalysts [BR:
ncd03110
]
Heat shock proteins
HSP60 / Chaperonin
ACONDI_02144 (groL)
Mitochondrial biogenesis [BR:
ncd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACONDI_02144 (groL)
Exosome [BR:
ncd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACONDI_02144 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACONDI_02144 (groL)
Exosomal proteins of breast cancer cells
ACONDI_02144 (groL)
Exosomal proteins of colorectal cancer cells
ACONDI_02144 (groL)
Exosomal proteins of bladder cancer cells
ACONDI_02144 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
AAA_25
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
UMZ74550
LinkDB
All DBs
Position
complement(2250379..2252019)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFREEARRELEAGVDKLADTLKVTLGPKGRNVVLEKKFGSPEITNDGVTIAREIE
LKDHFENMGAQLVKEVATKTNDVAGDGTTTATILGQAMIKQGIKNVTAGANPMIIRKGIQ
KAVDAAVDELSKNSKSVEDRESISQVASISANDEEVGNLIAEAMEKVGKDGVITVEESKS
FKTDLRVVEGMQFDRGYVSPYMVTDNEKMEAILDEPYILITDKKIANVQEVLPLLEKVVQ
QGKQVLLIAEDVEGEALATLVVNKIRGTFTCVGVKAPGFGDRRKAMLEDIAVLTGGQVIS
EDVGLELKNADISMLGKAKQVRVTKDETIIVDGQGNEEDIEKRISQIRTQAEETTSDFDK
EKLQERLAKLAGGVAVVEVGAATETEMKEKKLRIEDALNSTRAAVEEGIVAGGGTALIDI
LGALDNVDAEGDEATGVDIVRKALEEPLKQIAHNAGAEGTIVVEKVKTEATNHGYNALKN
EYGNMLDAGIVDPKKVTRNAIQNAASIAAMFLTTEGVVADLPEEDGGDDMAGGMGGMGGM
GGMPPM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagagattaaatttagagaagaagccagacgtgaactagaagctggtgttgat
aaacttgcagatactttgaaggtaacccttggtcctaaagggagaaacgttgttttagag
aagaagtttggttctcctgagataactaatgacggtgtaactatcgcaagagaaattgag
ttaaaagaccattttgaaaatatgggagctcagctagtaaaagaggttgctacaaagact
aacgatgttgcaggtgacggtactacaactgctacaattcttgggcaggctatgatcaaa
cagggaattaaaaacgttactgcaggggctaacccaatgatcataagaaaaggtattcaa
aaagctgtggatgctgcggtagatgagctttcaaagaactcaaagtcggttgaagataga
gagtcaatctctcaggttgcttctatctcagcaaatgacgaagaagtaggaaaccttatt
gcagaagctatggagaaagtaggaaaagacggagtaatcactgtagaagaatctaagagc
tttaagactgacttgagagtagttgaaggtatgcagtttgatagaggatatgtctctcca
tatatggttactgataatgaaaagatggaagcgatcttagacgagccatatatactaata
actgataaaaagattgctaatgtacaggaagtactaccactattagaaaaagtagtacag
caaggaaaacaggtattattaatcgcagaagatgttgaaggagaagcccttgctacatta
gttgttaacaaaattagaggaacatttacctgtgtaggagttaaggcgcctggatttgga
gatagaagaaaagctatgctagaagatatagctgttctaacaggtggtcaggttataagc
gaggatgttggtttagagcttaagaatgctgacattagcatgctaggtaaagcaaagcag
gttagagtaactaaagatgaaactatcatagtagatggtcagggtaacgaagaagatatc
gaaaagagaatctctcaaattagaactcaggcagaagagacaacttctgactttgataaa
gaaaagcttcaagaaagacttgctaagctagctggtggagttgctgttgtagaagttggt
gctgcaacagaaacagagatgaaagaaaagaaattaagaatagaagacgcactgaattcc
acacgagctgcggtagaagaaggaatcgttgccggtggaggtacagcgttgattgatatc
cttggagcccttgacaatgtcgatgctgaaggtgatgaagctaccggagtagatatagta
agaaaagccctagaagagccgcttaagcagatagctcataatgcaggggcagaaggtaca
attgttgtagaaaaagttaaaacagaggcgactaaccacggatataacgctttgaagaat
gagtatggtaatatgttagatgcaggaattgtagatccaaagaaagttaccagaaatgct
atacaaaatgcagccagtatagctgccatgttcttaactacagaaggagtagttgcagat
cttcctgaagaagatggaggagacgacatggcaggtggcatgggcggcatgggaggcatg
ggcggcatgcccccaatgtaa
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