Natranaerofaba carboxydovora: ACONDI_02222
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Entry
ACONDI_02222 CDS
T07970
Symbol
polC_3
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03030
DNA replication
ncd03430
Mismatch repair
ncd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACONDI_02222 (polC_3)
03430 Mismatch repair
ACONDI_02222 (polC_3)
03440 Homologous recombination
ACONDI_02222 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncd03032
]
ACONDI_02222 (polC_3)
03400 DNA repair and recombination proteins [BR:
ncd03400
]
ACONDI_02222 (polC_3)
Enzymes [BR:
ncd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACONDI_02222 (polC_3)
DNA replication proteins [BR:
ncd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACONDI_02222 (polC_3)
DNA repair and recombination proteins [BR:
ncd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACONDI_02222 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UMZ74623
LinkDB
All DBs
Position
complement(2337476..2338294)
Genome browser
AA seq
272 aa
AA seq
DB search
MSILVRDFFLRLQKGQQRKKNEASIGRVYQSEPDRTTSKMLGAKCKEIKNNVEYDLNITD
TEFVVFDTETTGLKPYEGDEITSIAGVVVKNGEIQEDKVFSRLVNPMRHIPKKVEKLTGI
TNEMVEDKEPVGPVLCEFLEFIKCRPLVAHFASFDLTFLNLKLNWFCQEEIHNPVLDTFQ
LGQVLYPHLPSHSLDYLLEYLKIKVKGRHSAEGDAYMTAQVLINYINKLQKHNINTLQEV
RDLIQNKDSEYYKEKFLNKYERIEEFKEFPYC
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttgtctattttagttagagactttttcttaaggttacaaaaaggtcagcaaaggaaaaaa
aatgaggcgagtataggcagagtatatcaatctgaaccggatagaactacctctaaaatg
cttggagcaaagtgtaaagaaataaaaaataacgtggaatatgatctaaacataacagat
acagagtttgtggtatttgatactgaaactactggtttaaagccgtatgaaggtgatgaa
atcacctcaattgccggtgtggtagtgaaaaatggtgagattcaagaggataaagttttt
agtaggctcgtaaaccccatgaggcacatacccaaaaaagtggaaaaattaacagggata
accaatgaaatggtggaagataaagaacctgtaggccctgtactgtgtgagtttttagaa
tttattaaatgtaggcctttggtagctcattttgcaagctttgatctgacttttctgaat
ttaaaattaaattggttctgccaggaggaaattcataacccggtattagatacttttcaa
ttaggtcaggtgctttatcctcacttgccaagtcacagcctagattatcttctcgagtat
ctgaagataaaagtaaaaggtagacacagcgcagaaggagatgcatacatgacagctcaa
gtcctgatcaactatattaataagttacaaaagcacaatataaataccttgcaagaagta
agggatttgatacagaataaagattcagaatattacaaagaaaagttcttaaacaaatat
gaaagaattgaggagtttaaagaatttccctattgctag
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