Natranaerofaba carboxydovora: ACONDI_02639
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Entry
ACONDI_02639 CDS
T07970
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ncd
Natranaerofaba carboxydovora
Pathway
ncd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACONDI_02639 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncd03400
]
ACONDI_02639 (recD2)
Enzymes [BR:
ncd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACONDI_02639 (recD2)
DNA repair and recombination proteins [BR:
ncd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACONDI_02639 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
HHH_2
AAA_11
Helicase_RecD
PIF1
HHH
AAA_22
AAA_28
UvrD-helicase
nSTAND3
AAA_24
NTPase_1
SLFN-g3_helicase
DEAD
DNA_pol_lambd_f
AAA_12
AAA
T2SSE
TraI_hel_assoc_N
AAA_16
Pepco
AAA_29
ATPase_2
5_3_exonuc
ABC_tran
UvrD_C
NPHP3_N
WHD_MCM8
AAA_17
UPF0158
Motif
Other DBs
NCBI-ProteinID:
UMZ75028
LinkDB
All DBs
Position
complement(2796091..2798376)
Genome browser
AA seq
761 aa
AA seq
DB search
MTTSLEGILKNITFHNSDNLFTVAKLLTRPDNEVITVVGQLPELTPGERLVVNGKFESHK
KFGRQFHVESYEIKLPVTTEGLVRFLGSGMIKGIGPKTAESLVSHFGKNILQIIENDPER
LTEVDGIGAEKAKKISKGFLEHKKVKDIMVFLQGFGVSPAYALKIYKRFGDKTMELVSEN
PYCLAREVFGIGFKIADKIARNMGIGENSKERKKAAILYILEEASNKGDTYLTKKELEEA
LIEFEVTTEDMPAIIDELSKAKEIILEDNKEEGQIIYLPPYYHAEIGIAKRLTELETMGG
GVLKEHLNNWNKMVENLAGSISTPDDASKEKLGNEEANEANKEVNNEATKGANTVELSTE
QLEVLNKLPHSGAMVITGGPGTGKTTVIKSIIYLAEKFGLNIYLGAPTGRAAKRMSEATG
KEAKTIHRLLEFSYESGEGMKFNKNTENPLECDLLIIDEASMLDLLLMNRLVKAVPPGCK
LVLVGDIDQLPSVGAGNVLRDIIDSHKIPVVRLKTIFRQAKESMVVVNAHRINQGKFPML
NVKDKDFFFINREEPEEVVNTIISLCKHRLPKYENLHPRDDIQVLAPMRRTDTGVDNLNT
SLQGALNPPSGQKPEISFGTFSYRLGDKLMQLKNDYQKEVFNGDMGIIHHVDAEEGSIKV
RFEENTEDRIIEYERNELDSLIPAYAVSVHKSQGSEYPVVVMPVTTQHFIMLQRNLIYTA
ITRAKKLVVLVGTKKAIGMAISNNKVESRNSLLDYRLKQFK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacaagcttagaaggtattctaaaaaacattacttttcataattctgataatcta
tttaccgtggcaaaacttcttacaaggccggataatgaagtaataacagtcgtaggccag
ctgccagagctaacacctggagagcggcttgttgtaaacggcaaatttgaaagccacaaa
aaatttggccgccagttccatgtagaaagctatgaaataaaacttcctgtaacaacagaa
ggacttgtcaggtttcttggttctgggatgataaaaggcattggccccaaaactgccgag
agccttgtaagccattttggcaaaaacatcctgcaaattatcgaaaacgatcctgaaaga
cttactgaagtggacggaataggcgcagaaaaagctaaaaaaatctctaaaggatttttg
gagcacaaaaaagttaaagacatcatggtatttttgcagggttttggggtaagtcctgcc
tatgcccttaagatatataagcgttttggtgacaagactatggagctagtctcagaaaac
ccctactgtcttgctagagaagtctttggtataggttttaagatagccgacaaaatagca
aggaatatgggtattggtgaaaactcaaaagaaagaaaaaaagcagccatactctacata
ctagaagaagcatccaacaagggagacacttatctcaccaaaaaagaacttgaggaggct
ctaattgaatttgaagtaactacagaggatatgccagcaataatagatgaactatctaaa
gcaaaagaaataatcctagaagataacaaagaagaaggtcaaatcatctatcttcccccg
tactaccatgcagagataggaatcgcaaaaagattaacagagcttgaaaccatgggggga
ggagtcctaaaagagcaccttaataactggaataaaatggtcgaaaaccttgcgggcagc
attagcacccctgatgatgcttctaaggaaaaattgggtaatgaggaagctaatgaagct
aataaagaagttaataatgaagctactaaaggagctaatacagttgaattatctactgaa
cagcttgaagtcctaaacaaactgccccactcaggagctatggttattacgggtggtcct
ggaacaggaaagaccaccgttataaaaagtattatttaccttgctgaaaaatttggtctt
aatatatatcttggagcacctactgggagagccgccaaaaggatgagtgaagccacaggg
aaagaggcaaaaaccattcatagacttttggagttttcttatgaatctggagaaggaatg
aaatttaataaaaacactgagaatcccctagaatgtgacctcttaatcatagatgaggct
tccatgctagatctcttgctgatgaatcggcttgtaaaagctgtcccgcctggatgtaag
ctagtccttgttggcgatatagaccagctaccttcagttggagcgggtaatgtattaaga
gatattattgactcacacaaaatccctgtcgttagactaaaaactatctttcgccaggcc
aaggagagtatggtagtagttaatgcccacaggattaaccagggcaaattcccaatgctt
aatgtcaaagacaaagattttttctttattaatagagaagagcctgaagaggtggtaaac
accataatatccttatgcaagcatcgtctaccaaagtacgagaacttacatccaagggat
gatatccaggtccttgctccaatgagaaggacagatacaggggtagataatctaaacaca
tctcttcaaggagcccttaaccccccgtcggggcagaaacctgaaatatcttttggtaca
ttttcttacaggcttggcgataagctgatgcagctaaaaaatgactaccaaaaagaagtt
tttaacggtgatatgggtataattcatcatgtcgatgcagaggaaggttctatcaaggta
agattcgaagaaaacactgaagacaggattatagaatatgaaagaaatgagcttgattcc
ttaatccctgcctatgctgtaagcgttcacaaaagccagggaagtgagtatccggtagtt
gttatgcccgtgacgacccagcactttatcatgctgcagcgaaacctgatctatacagct
ataacaagggccaagaagcttgtggttcttgtaggaaccaaaaaagctatcgggatggct
atctcaaataacaaagttgaaagtagaaattctcttcttgattatcgcctaaaacaattt
aaatag
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