Vairimorpha ceranae: NCER_100001
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Entry
NCER_100001 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nce
Vairimorpha ceranae
Pathway
nce03022
Basal transcription factors
nce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCER_100001
09124 Replication and repair
03420 Nucleotide excision repair
NCER_100001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nce03021
]
NCER_100001
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_100001
Transcription machinery [BR:
nce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCER_100001
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCER_100001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
Tfb4
ANCHR-like_BBOX
zf-HIT
Motif
Other DBs
NCBI-ProteinID:
EEQ83145
UniProt:
C4V6H4
LinkDB
All DBs
AA seq
335 aa
AA seq
DB search
MVGGFAWEKEYKRTWLDDERSDTIKEFKLNKFVYNDRKKGVLRHLHILIDISSSIDKNDY
LPSIRKNVIRSLEKFIPTFFLENPISGLSFSTVNEKTVKSTNSVEIADLLNQKGEGNFSL
LNGLYDAIDQIKSYTFCREILVIVSSLVLKDPDSYTDVIDLLRKHNIKVNIISLCGELMI
YKNIVESTGGKFFVPLNIDHFNYILRCMTVPGELNSSTINLIKLGFPKVIYEEGVCACHL
QLQSVGYECPLCKTFICSLPMGCPICELQLVSSLNIAKAFQHMYPLAPFTKCCNGVCFVC
NSPGNFSCEKCNSVYCDSCDLFVHNNLNFCLGCKN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcggtttcgcatgggaaaaagaatataaaagaacttggttagatgatgaaaga
agtgatactataaaagagtttaaattgaataaatttgtttataatgataggaaaaaagga
gttttgcgacatttacatattttaattgacatttctagttctatagataaaaacgattat
ttaccttcgataagaaaaaatgttattagatctttagagaaatttataccaacttttttt
cttgagaatcccatttctggattatctttttcaacggtcaatgaaaaaacggtaaaatct
acaaatagcgtagaaattgcagatcttttaaatcagaagggagaaggaaatttttcacta
cttaatggattgtatgatgccattgaccaaataaaatcttatacattttgtagagaaatt
ttagttattgtgtcaagtttggttctaaaagatcccgattcttacactgatgttattgat
ttactgcgtaaacataacattaaagttaatattattagtttatgtggagaactaatgatt
tataaaaatattgttgaatcaacaggtggtaaattttttgttccgctaaatattgaccac
tttaattacattcttaggtgtatgaccgtaccaggagaacttaatagtagtactattaac
ttgattaagcttggcttccctaaagtgatttatgaggaaggcgtatgtgcctgtcattta
caactgcaaagtgtgggttatgaatgtccattgtgtaaaacctttatttgttctttaccc
atggggtgccccatttgcgaattgcaacttgtcagctctttaaatattgcaaaagctttt
caacatatgtatccattagcaccttttacgaagtgttgtaatggcgtatgttttgtatgt
aacagccctggaaatttttcttgcgaaaaatgtaattccgtttactgcgatagttgtgat
ttatttgtacacaacaatcttaacttttgtttgggatgtaaaaattaa
DBGET
integrated database retrieval system
