Vairimorpha ceranae: NCER_100307
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Entry
NCER_100307 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K07466
replication factor A1
Organism
nce
Vairimorpha ceranae
Pathway
nce03030
DNA replication
nce03420
Nucleotide excision repair
nce03430
Mismatch repair
nce03440
Homologous recombination
nce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCER_100307
03420 Nucleotide excision repair
NCER_100307
03430 Mismatch repair
NCER_100307
03440 Homologous recombination
NCER_100307
03460 Fanconi anemia pathway
NCER_100307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nce03000
]
NCER_100307
03032 DNA replication proteins [BR:
nce03032
]
NCER_100307
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_100307
Transcription factors [BR:
nce03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NCER_100307
DNA replication proteins [BR:
nce03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NCER_100307
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NCER_100307
MMR (mismatch excision repair)
NCER_100307
DSBR (double strand breaks repair)
HR (homologous recombination)
NCER_100307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
CDC24_OB3
OB_MEIOB_N
HROB
RMI1_C
DUF223
Motif
Other DBs
NCBI-ProteinID:
EEQ82914
UniProt:
C4V787
LinkDB
All DBs
AA seq
573 aa
AA seq
DB search
MQPMKLEEGTVEVLFNNQNEHPLFNKPVLQVLMCQKVNHKEGEKLRYRAYLSDGLHYIRA
VFGSELTPLLETNQIEKYSLVKLDSFIFRLIKGNAYIYIYSLAGYENCNVEIGNPTPIYS
DGSNRTDTNKQKVNEDETPKKSKVAKSVENKQTEDPNKYTQINSINPFCNKWIIKGRIVL
KSDIRKFSNKKGEGKLFSFEIADDSGQIKVVAFSESVDIFYPIIEIGRVYTIQKGEIKMS
KKTFSNNNNDYEIQLDVNSEIKKVEDNETPKFFFNFVKIKDITSSNAPIDIVGIVKEAGE
AVSFIVKATQKESLRRNITLIDETGSIRATFWGAKAEEEIEVDSVLAIKSIKVSDFGGVS
LSSIHTSQIHKNPDISESHSLLGWYNTEGKNVKIDLPERDLKIFNISDVKNQEMPYSAVR
ATLMFIKEDNLMYDSCKEENCTKKVYKNEFGEYRCEKCDKNSYECTHRYLIHANISDSTG
QLWATLFNDQAILLLGMSASDFREMADNDPNQSQMFIKKFLYREYIIKLRSRQDNYNDEI
KMRHNISEIREVNYKEETKKEILYVEKLLRESN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccatgaaattggaagaaggaacagtagaagttttgtttaataatcaaaatgaa
catccactttttaataagcctgttttacaagtacttatgtgtcaaaaagtaaatcataaa
gaaggtgaaaaacttagatacagagcttatttatctgatggtttacattatataagagca
gtttttggttcagaattgacacctctccttgagacaaatcagatcgaaaaatattcttta
gttaaacttgatagttttatttttagacttattaagggaaatgcatacatttacatttat
tcacttgcaggttacgaaaattgtaatgtagaaattggtaacccaacgcctatatattcg
gatggatcgaatcgtactgacactaataagcaaaaagttaatgaagatgagacacctaaa
aaaagtaaggtagctaaatcagttgaaaataagcaaacagaagatccaaataagtataca
caaataaattcaattaaccctttttgtaacaaatggattataaaagggagaattgttctt
aaaagtgatatcagaaaattttcgaataaaaaaggcgaaggaaagctttttagttttgaa
attgcggacgattctggacaaataaaagtagttgctttttcagaatcagtggatattttt
tatccaattatcgagataggtcgggtttatactatccagaaaggagaaataaaaatgtct
aaaaaaacattttcgaataataacaatgattatgaaatacaacttgatgttaactctgaa
ataaaaaaggttgaagataacgagacaccaaagttcttttttaattttgtaaaaattaaa
gatattacatcaagtaatgcgcctattgatattgttggtatagttaaagaagctggtgaa
gcagtttcttttattgttaaagctacacaaaaagagtcattacgtagaaatattactttg
atcgatgaaacgggaagtattagagctactttttggggagcaaaagccgaggaagaaatt
gaagttgattctgtcttagcgataaagagtattaaagtgtctgattttggaggagtaagt
ctgtcatcaattcatacctcgcaaattcataagaatccagatatttcagaatctcattct
ttgttgggttggtataacaccgaaggtaaaaatgttaaaatagacttgcctgaacgagat
cttaaaatttttaatattagtgatgtaaaaaatcaagaaatgccttattcggctgtacgt
gctaccttaatgtttattaaagaagataatcttatgtatgactcttgcaaagaagaaaat
tgtacgaaaaaggtttataaaaatgaatttggtgaatatagatgtgagaaatgtgacaaa
aattcttatgagtgtacacatagatatcttatacatgctaatattagtgactctactgga
caattgtgggctactttatttaatgatcaggcgatattacttttaggaatgtctgcttca
gattttagagagatggctgataatgatccaaatcagtctcaaatgtttattaaaaaattt
ttgtacagagaatatatcatcaagcttagatctagacaagataattacaatgatgaaatt
aagatgagacataatattagtgaaataagagaagttaattacaaagaagaaacgaagaag
gaaattttatatgttgaaaaattgctgagagaaagcaattaa
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