Vairimorpha ceranae: NCER_100600
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Entry
NCER_100600 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
nce
Vairimorpha ceranae
Pathway
nce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCER_100600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_100600
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCER_100600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
DUF5405
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
EEQ82644
UniProt:
C4V804
LinkDB
All DBs
AA seq
703 aa
AA seq
DB search
MKNIGNLEVFKYEKKEGLFFVNPPYTKFLKNDMHKEMKIQEEDLEILIKDLLLVKNCKVE
EYENGRCTKEGFPGNWKDFTDLCLDHRLPPSLCSLKISGNKVDLCFIKTTESFLNTCIFE
DDDVYSNLYTILSEINAYEIIYDDKNLVFIENMGIITHLYDKAEDSVKLMKKFLKIDLIT
IKPYFRPNVCIIDDNTLEALNIHSSEKCVLSLFNCYTIQGKRLLLQFFKQPLKNIDEIEA
RLDIIEVLRDIDFDILKDFPDLLKITKKITKISLLEILKLHQVTQKIPILLSKMQNPLLI
NDFYTPLNNINIRNILNDIEEVIDVKNSQRNIIKFNKKICKITELYCLLDEINKKCQNEY
LRLIKLSDKIKYTEGEDFFKITRIEYKKSELILKNNNVLVTSVLKTGVNFTTKRMSELSL
ERNNIKECINKETSKIVNDLRNKIQKYINEFEIFNYIVALIDVFSAIGRKSRDIGYTRPK
FINYSKEINEDKNYFDNSSQLEIIDGFHPILEDKNFITNCIKFDKTRLCIITGPNMGGKS
TFLKMIGVISVLAQVGCYVPAKYTILPIFDGIYIRIGANDCTYKGSSTFMVEMKDIARIC
RMCTNNSLVLIDELGRGTSEIDGLSIAKAVRDFLFEKKCITLFATHFPELCDAKTLNKKA
QAIQLALTYKIVDGICDTSWGLNVAKLVNFPDSVIKEIENQQN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatattggaaatttggaagtttttaaatatgaaaaaaaagaaggtttatttttt
gtaaatccgccgtacacaaaatttttaaaaaatgatatgcataaagaaatgaaaatacag
gaagaggatctagaaattcttattaaagatcttttacttgtaaaaaattgtaaagtagaa
gaatatgaaaatggaagatgtactaaagaaggatttcctggtaattggaaagattttaca
gatttgtgtttagatcatagacttccaccatctttatgtagcttaaaaataagtggtaat
aaggttgatttgtgttttataaaaacaacagaatcttttttaaatacttgtatatttgag
gatgatgatgtatatagcaatttatatacaatattatcagaaattaatgcttatgagata
atttatgatgataaaaatcttgtatttatagaaaatatgggtattattactcatctttac
gataaagcagaggattcagttaaattaatgaagaaatttctaaaaatagatttaataacc
attaagccttattttagacctaatgtttgtattattgatgataatactttagaagcttta
aatatacactcatctgaaaaatgtgtattaagtttatttaattgttatacaattcaagga
aaaagacttttgttacaattttttaaacaaccattaaaaaatattgatgagattgaagca
cgtttagatattattgaagttctaagagatatagattttgatattttaaaagattttcct
gatttattgaaaataactaaaaaaataactaaaatttctttactagaaatacttaaattg
catcaagttacacagaagattcctattcttctatctaaaatgcaaaatccattattaatt
aatgatttttatactccgctaaataacataaatatacgaaatattttaaatgacatagaa
gaagttatagatgttaagaattcacaaaggaatattataaaatttaataaaaaaatctgt
aaaattacggaattatattgtttgttagatgaaattaataaaaagtgtcaaaatgaatac
ttaagattaataaaattatccgataaaattaaatatacggaaggagaagatttttttaaa
ataacaagaattgaatataaaaaatcagaattgatactaaaaaataataatgttcttgtt
acgagtgtattaaaaacgggagtaaattttacgactaaaagaatgtcagagttaagttta
gaaagaaataatataaaagaatgtattaataaagaaacaagtaaaatagtaaatgattta
cgaaataaaatacaaaaatatataaatgaatttgaaatatttaattatattgttgcacta
atagatgtatttagtgcaataggaagaaaaagtagggatattggatatactagacctaaa
tttataaattacagtaaggagattaatgaagataaaaattattttgataattcttctcaa
ctggaaattattgacggttttcatccaattttagaagataaaaattttattacaaattgt
ataaaatttgataaaacaagactatgcataatcactggacctaatatgggaggtaaaagt
acatttctaaaaatgataggtgtaatatctgttttggcacaagtcggttgttatgtacct
gctaaatatacaatactacctatatttgatggtatttatattcgaataggtgcgaatgat
tgtacttacaaaggatcatcaacttttatggttgaaatgaaagatattgctcggatatgt
agaatgtgcactaataattcattagtgcttattgatgagttgggaagaggtacatctgaa
attgatggattaagcatagccaaagctgtaagagattttttatttgaaaagaaatgtatt
actttattcgccacacattttcctgaactgtgtgatgcaaaaactttaaataaaaaagca
caagctattcaattagcacttacatataaaatagtagatggaatatgtgatacatcatgg
ggacttaatgttgcaaaactggttaatttccctgactcagttataaaagaaatagaaaac
caacaaaattaa
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