KEGG   Vairimorpha ceranae: NCER_100748
Entry
NCER_100748       CDS       T01614                                 
Name
(GenBank) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
nce  Vairimorpha ceranae
Pathway
nce03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nce00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    NCER_100748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nce03019]
    NCER_100748
Messenger RNA biogenesis [BR:nce03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     NCER_100748
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd ASA1 Beta-prop_Aladin WD40_MABP1-WDR62_2nd DSE1_N WDR90_beta-prop_4th Beta-prop_RIG_2nd CFAP251_N Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 PROPPIN PEP5_VPS11_N PAC11 Beta-prop_NWD2_C TRM82_WD Beta-prop_WDR11_2nd
Other DBs
NCBI-ProteinID: EEQ82519
LinkDB
AA seq 388 aa
MNIKDIVNVRFENPKFKFDGKRMRVLQERKVVDWSSALILQMKTRSLDPIIINPNYQLSN
QIINLKSPDQCYNDLSYAITTKFEHLSMNKVRSPVHIVRWTPDGRRCMSGTATGEFSLWN
GYGYNFETILQAHESAVRTMCWSHSGSFLVSADNLGCVKYWHPSMNNIQVFQGHEEPIRD
ISFSYNDTKFCTASDDSTIKIWDCNDSRCESVLFGHNWDVRNAQWHKYKSLIASAGKDNL
IKFWDPRAAHELYTLHSHKSTLLALKWSLNGNYLLSGGKDQIVRIFDIRNMKEAFAHRDH
KKEITSLAIHPIIPDYFVSGCGDGTIYHWQMFNETPMEVVTNGHEFTIWSMEFHPVGHTL
ASGSMDNTVRFWIRPRPDDGKVVNEEEL
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaatattaaagacattgtgaatgtacgttttgaaaatccaaaatttaaatttgatggt
aaacgtatgcgagttttacaagaacgtaaagtagttgattggagctcagcactaattctt
caaatgaaaacaagatcattagatccaattataattaatcctaactaccaattatctaat
cagattattaaccttaaatcgcctgatcaatgttataatgatctatcttatgccattacc
actaaatttgagcatcttagcatgaataaagtacgatcaccggttcatattgtgcgatgg
acacccgacggaagaagatgtatgagtggaactgccactggagaattttcactgtggaac
ggatacggttacaacttcgaaaccattcttcaggcacatgaatctgctgtgcgaacaatg
tgctggtcgcattcaggatcatttcttgtatcagcagataatcttggatgtgtaaaatat
tggcatccttctatgaataatattcaggtctttcaaggacatgaagaacccattagagat
ataagtttttcatataatgacacaaaattctgtacagcaagtgatgattctacaattaaa
atatgggattgtaatgattcaagatgtgaatcggttttatttggtcataattgggatgtt
agaaatgctcaatggcacaaatataaaagtttaatagctagtgcaggaaaagacaacttg
ataaaattttgggacccaagagcagcccatgagctgtataccttacattcacataaaagt
actttattagctcttaaatggtctcttaacggaaattatttgctgagcggaggcaaagac
caaattgttagaatttttgatatacgaaatatgaaagaggcttttgcacacagagatcat
aaaaaagaaattacttcacttgctatacatcccataattcctgattattttgtaagtggt
tgtggagatggtacaatttatcactggcagatgtttaatgagacacctatggaagtcgtt
acaaatggacatgagtttacaatttggtctatggaatttcatcctgtaggacatacattg
gcttctggatctatggataatacagtaagattttggataagaccaagacctgatgatgga
aaggttgttaatgaggaagaattataa

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