Vairimorpha ceranae: NCER_100784
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Entry
NCER_100784 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K06100
symplekin
Organism
nce
Vairimorpha ceranae
Pathway
nce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCER_100784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nce03021
]
NCER_100784
03019 Messenger RNA biogenesis [BR:
nce03019
]
NCER_100784
Transcription machinery [BR:
nce03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCER_100784
Messenger RNA biogenesis [BR:
nce03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
NCER_100784
U7-dependent histone pre-mRNA processing factors
NCER_100784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
MCP_C
Motif
Other DBs
NCBI-ProteinID:
EEQ82492
UniProt:
C4V8G3
LinkDB
All DBs
AA seq
578 aa
AA seq
DB search
MDTIKNMLLVNFTENNLYILFFYYHQMNPIEVMYFWNCVLNLLDESNVLLVLGFIFDLQD
TPLHFPRYAQKSLNFHIHQVNKKIAKLLSKEYIFYVKNLKLFKFAKELKAQYLHEKKFDS
NLFFVNNLYELLIKTSTIEISNSIESYFNFVSFDNVSVDVTSKLLNNIYIVELKQRNLYV
KYICTILTDPKDILDFIFYHMTEEEPSILVEYIYLLNKTLYNGLLNVLYENKRFYRVEII
RLFFDINLVKLDLKDENIELIKYFLVNKPIFVNDLYEVLKNKVSKKHLTGLYIEHYEILK
HYKFDLNIEDLLSIASDKPDLLYEIYDMSLDGEQKQRFYSIFKMLDEDFIINFLIKHSDL
DLVSYLLTNRQLKNNLKNYIITRYKNIPALVYKMFIYFDKSDVVNYIEDFLIDKKSLEYF
LFVLKPTDILIYAHEMSNISKGIKILDICFDSPAFNENDFIYTLNTIEDSMPALIIRTLI
LTYKKYPHLRNFTVNFLYKIINKNALQNSKLKTGIIKCLEILKSSSVEIIASLSEERILT
ILDGSKMLKDLCIETVYKADCKYSKEYNILRDVLRKYY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacacaataaaaaatatgttactcgtaaactttacagaaaataatttgtacattctg
tttttttactatcatcaaatgaatcctatagaagttatgtatttttggaattgtgtttta
aatttgcttgatgaatctaatgttctactggtactaggatttatttttgatttacaggat
actccacttcattttccaagatatgcacagaaatcgttaaattttcacatacaccaagtt
aataagaaaattgcaaagttactttctaaagaatatattttttatgtaaaaaatttaaag
ctatttaaatttgctaaagaattaaaggcacaatatttacacgaaaagaaatttgatagt
aatttgttttttgtaaataatttatatgagctactgattaaaacatctacaatagaaatt
tctaattccatagaaagttatttcaactttgtatcatttgataatgtatctgtggatgta
acaagtaaattattaaataatatttatatagttgaattaaaacagcggaatttatacgtt
aaatatatttgtactatccttactgaccccaaagacatattggattttattttttaccat
atgactgaggaagaacctagtattttggtagagtacatttatctactcaataaaacactt
tataacggtttattaaatgtactgtatgagaataaaagattttacagggtagaaattata
agattgttttttgatataaatcttgtaaagttggatttaaaggacgagaatattgaatta
ataaaatattttctagtaaataagccaatatttgtaaatgacttatacgaagtgttaaaa
aataaggtaagtaaaaaacaccttacaggactatatattgaacattacgaaatattaaaa
cattataagtttgatctaaacatagaagatttactttctattgcttctgataaaccggac
ttgttgtacgaaatatatgatatgtctctagatggtgaacagaaacagcgcttttattca
atttttaaaatgctagatgaggactttattataaattttttgatcaagcattcagatctt
gacttggtttcttatttattaactaaccgacagttaaaaaataatcttaaaaattacatt
atcacgagatataaaaatataccagctcttgtgtataaaatgttcatctactttgacaaa
tctgacgtcgtaaattacatagaagattttctcatcgataaaaaatcgcttgaatatttt
ttatttgttttaaaacccacagacatcttaatttatgcgcatgaaatgtctaacatttca
aaaggaataaaaattcttgatatttgttttgattctcctgcatttaacgaaaatgatttt
atatacacactcaatactatagaagattctatgcctgccttaataataaggacattaata
ctaacatacaaaaaatatccacatttgagaaattttactgttaattttttgtataaaatt
ataaataaaaatgctttacaaaattctaaattaaaaacaggaattattaaatgtctagaa
attttaaaaagttcatcggtagaaattattgcttctttgtcagaagaaagaattttaact
attttagatggaagtaagatgttaaaggatttatgtattgagactgtttataaagccgat
tgcaaatatagtaaagaatataatattcttagagatgtactacgtaaatattattaa
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